Evidence map›Paper›PMID 14761998›Full record

ArticleJournal of bacteriology2004

The lgtABCDE gene cluster, involved in lipooligosaccharide biosynthesis in Neisseria gonorrhoeae, contains multiple promoter sequences.

Derek C Braun, Daniel C Stein

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Genus-Wide Comparative Genomics Analysis ofInternational journal of genomics · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Derek C BraunDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742, USA.
Daniel C Stein
University of Maryland, College Park · US

Funding

LIPOOLIGOSACCHARIDE BIOSYNTHESIS IN NEISSERIACEAER01AI024452 · NIAID · UNIVERSITY OF MARYLAND COLLEGE PK CAMPUS · PI STEIN, DANIEL C · 1995 to 2004
$1.3M
Lipooligosaccharide biosynthesis in NeisseriaceaeR56AI024452 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI STEIN, DANIEL C · 2006 to 2006
$359k
PREDOCTORALF31AI009636 · NIAID · UNIVERSITY OF MARYLAND COLLEGE PK CAMPUS · PI BRAUN, DEREK C · 1997 to 2000
$1k
LIPOOLIGOSACCHARIDE BIOSYNTHESIS IN NEISSERIACEAER29AI024452 · NIAID · UNIVERSITY OF MARYLAND COLLEGE PK CAMPUS · PI STEIN, DANIEL C · 1988 to 1992
–
NIAID NIH HHS AI24452NIAID NIH HHS F31 AI009636NIAID NIH HHS R01 AI024452NIAID NIH HHS R56 AI024452PHS HHS SI09636
6 · The paper itself

Abstract

Biosynthesis of the variable core domain of lipooligosaccharide (LOS) in Neisseria gonorrhoeae is mediated by glycosyl transferases encoded by lgtABCDE. Changes within homopolymeric runs within lgtA, lgtC, and lgtD affect the expression state of these genes, with the nature of the LOS expressed determined by the functionality of these genes. However, the mechanism for modulating the amount of multiple LOS chemotypes expressed in a single cell is not understood. Using mutants containing polar disruptions within the lgtABCDE locus, we determined that the expression of this locus is mediated by multiple promoters and that disruption of transcription from these promoters alters the relative levels of simultaneously expressed LOS chemotypes. Expression of the lgtABCDE locus was quantified by using xylE transcriptional fusions, and the data indicate that this locus is transcribed in trace amounts and that subtle changes in transcription result in phenotypic changes. By using rapid amplification of 5' cDNA ends, transcriptional start sites and promoter sequences were identified within lgtABCDE. Most of these promoters possessed 50 to 67% homology with the consensus gearbox promoter sequence of Escherichia coli.

Indexed as

Bacterial ProteinsMultigene FamilyPromoter Regions, GeneticBase SequenceGalactosyltransferasesGene ExpressionGlycosyltransferasesLipopolysaccharidesMolecular Sequence DataN-AcetylglucosaminyltransferasesNeisseria gonorrhoeaeTranscription, GeneticBacterial ProteinsGalactosyltransferasesGlycosyltransferasesLgtA protein, bacteriaLgtC protein, NeisseriaLgtE protein, Neisseria gonorrhoeaelipid-linked oligosaccharidesLipopolysaccharidesN-Acetylglucosaminyltransferases

Identifiers

PMID14761998
PMCPMC344203
OpenAlexW2102156745

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.