Evidence map›Paper›PMID 14757836›Full record

ArticleNucleic acids research2004

A new gamma-interferon-inducible promoter and splice variants of an anti-angiogenic human tRNA synthetase.

Jianming Liu, Eveline Shue, Karla L Ewalt, Paul Schimmel

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Aminoacyl-tRNA synthetases as therapeutic targets.Nature reviews. Drug discovery · 2019
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Architecture and metamorphosis.Topics in current chemistry · 2014
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Aminoacyl tRNA synthetases and their connections to disease.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jianming LiuThe Skaggs Institute for Chemical Biology and the Department of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, BCC-379, La Jolla, CA 92037, USA.
Eveline Shue
Karla L Ewalt
Paul Schimmel
Scripps Research Institute · US

Funding

Components of Translation in Signal TransductionR01CA092577 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI SCHIMMEL, PAUL R · 2001 to 2016
$4.5M
NCI NIH HHS CA92577NCI NIH HHS R01 CA092577
6 · The paper itself

Abstract

Two forms of human tryptophanyl-tRNA synthetase (TrpRS) are produced in vivo through alternative mRNA splicing. The two forms, full-length TrpRS and mini TrpRS, are catalytically active, but are distinguished by the striking anti-proliferative and anti-angiogenic activity specific to mini TrpRS. Here we describe two new splice variants of human TrpRS mRNA. Their production was strongly regulated by gamma-interferon (IFN-gamma), an anti-proliferative cytokine known to stimulate the expression of other anti-angiogenic factors. A new IFN-gamma-sensitive promoter was demonstrated to drive production of these splice variants. In human endothelial cells, both the newly discovered and a previously reported promoter were shown to respond specifically to IFN-gamma and not to other cytokines such as tumor necrosis factor-alpha, transforming growth factor-beta, interleukin-4 or erythropoietin. In addition, both promoters were stimulated by the 'downstream' interferon regulatory factor 1 that, in turn, is known to be regulated by the 'upstream' signal transducer and activator of transcription 1alpha subunit. Thus, the tandem promoters provide a dual system to regulate expression and alternative splicing of human TrpRS in vivo.

Indexed as

5' Untranslated RegionsAlternative SplicingAngiogenesis InhibitorsBase SequenceCells, CulturedDNA-Binding ProteinsEndothelial CellsGene Expression Regulation, EnzymologicHeLa CellsHumansInterferon-gammaInterferon Regulatory Factor-1IsoenzymesPhosphoproteinsPromoter Regions, GeneticRNA, Messenger5' Untranslated RegionsAngiogenesis InhibitorsDNA-Binding ProteinsInterferon-gammaInterferon Regulatory Factor-1IRF1 protein, humanIsoenzymesPhosphoproteinsRNA, MessengerTryptophan-tRNA Ligase

Identifiers

PMID14757836
PMCPMC373357
OpenAlexW2040241746

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.