Evidence map›Paper›PMID 14756303›Full record

ArticlePlant molecular biology2003

Characterization of all the subunits of replication factor C from a higher plant, rice (Oryza sativa L.), and their relation to development.

Tomoyuki Furukawa, Toyotaka Ishibashi, Seisuke Kimura, Hiroshi Tanaka, Junji Hashimoto, Kengo Sakaguchi

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. RiceInternational journal of molecular sciences · 2020
    Article
  6. Article
  7. Review
  8. Article
  9. ShRNA-mediated silencing of the RFC3 gene suppress ovarian tumor cells proliferation.International journal of clinical and experimental pathology · 2015
    Article
  10. Article
  11. Regulating DNA replication in plants.Cold Spring Harbor perspectives in biology · 2012
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Tomoyuki FurukawaNational Institute of Agrobiological Sciences, 2-1-2 Tsukuba-shi, Ibaraki-ken 305-8602, Japan.
Toyotaka Ishibashi
Seisuke Kimura
Hiroshi Tanaka
Junji Hashimoto
Kengo Sakaguchi
Tokyo University of Science · JPInstitute of Agrobiological Sciences · JPNiigata Agricultural Research Institute · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Replication factor C (RFC), which is composed of five subunits, is an important factor involved in DNA replication and repair mechanisms. Following previous studies on the RFC3 homologue from rice (Oryza sativa L. cv. Nipponbare) (OsRFC3), we succeeded in isolating and characterizing one large and three small subunits of RFC homologues from the same rice species and termed them OsRFC1, OsRFC2, OsRFC4 and OsRFC5. The plant was found to have all RFC subunits known in yeasts, human and other eukaryotes. The open reading frames of OsRFCs encoded a predicted product of 1021 amino acid residues with a molecular mass of 110.8 kDa for OsRFC1, 339 amino acid residues with a molecular mass of 37.4 kDa for OsRFC2, 335 amino acid residues with a molecular mass of 36.8 kDa for OsRFC4, and 354 amino acid residues with a molecular mass of 40.5 kDa for OsRFC5. All the OsRFC subunits have highly conserved amino acid motifs among RFC proteins, RFC box, and an unrooted phylogenetic tree shows each OsRFC subunit belongs to each RFC subunit group. These subunits showed differences in their expression patterns among tissues. The transcripts of OsRFCs were expressed strongly in the proliferating tissue, the shoot apical meristem (SAM), and very weakly in the mature leaves which have no proliferating tissues. However, in young leaves and flag leaves, tissue-specific expression of OsRFC3 and OsRFC4 was shown. On the other hand, cell cycle arrest by cell cycle inhibitors resulted in significant differences in OsRFC expression patterns. These results suggest the functional differences of each OsRFC subunit in tissues and the plant cell cycle. The roles of these molecules in plant DNA replication and DNA repair are discussed.

Indexed as

AnimalsAphidicolinArabidopsisCell CycleChromosome MappingChromosomes, PlantCloning, MolecularColchicineDNA-Binding ProteinsDNA, ComplementaryDrosophilaExonsGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantHydroxyureaAphidicolinColchicineDNA-Binding ProteinsDNA, ComplementaryHydroxyureaProtein SubunitsReplication Protein CRNA, MessengerSucrose

Identifiers

PMID14756303
OpenAlexW1972533756

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.