Evidence map›Paper›PMID 14749385›Full record

ArticleMolecular and cellular biology2004

Recycling of the U12-type spliceosome requires p110, a component of the U6atac snRNP.

Andrey Damianov, Silke Schreiner, Albrecht Bindereif

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. The RNA-binding protein SART3 promotes miR-34a biogenesis and GThe Journal of biological chemistry · 2019
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Network of coregulated spliceosome components revealed by zebrafish mutant in recycling factor p110.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrey DamianovInstitut für Biochemie, Justus-Liebig-Universität Giessen, D-35392 Giessen, Germany.
Silke Schreiner
Albrecht Bindereif
University of Giessen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

U12-dependent introns are spliced by the so-called minor spliceosome, requiring the U11, U12, and U4atac/U6atac snRNPs in addition to the U5 snRNP. We have recently identified U6-p110 (SART3) as a novel human recycling factor that is related to the yeast splicing factor Prp24. U6-p110 transiently associates with the U6 and U4/U6 snRNPs during the spliceosome cycle, regenerating functional U4/U6 snRNPs from singular U4 and U6 snRNPs. Here we investigated the involvement of U6-p110 in recycling of the U4atac/U6atac snRNP. In contrast to the major U6 and U4/U6 snRNPs, p110 is primarily associated with the U6atac snRNP but is almost undetectable in the U4atac/U6atac snRNP. Since p110 does not occur in U5 snRNA-containing complexes, it appears to be transiently associated with U6atac during the cycle of the minor spliceosome. The p110 binding site was mapped to U6 nucleotides 38 to 57 and U6atac nucleotides 10 to 30, which are highly conserved between these two functionally related snRNAs. With a U12-dependent in vitro splicing system, we demonstrate that p110 is required for recycling of the U4atac/U6atac snRNP.

Indexed as

Antigens, NeoplasmBase SequenceBinding SitesHeLa CellsHumansModels, BiologicalMolecular Sequence DataProtein BindingRibonucleoproteins, Small NuclearRibonucleoprotein, U4-U6 Small NuclearRNA-Binding ProteinsRNA, Small NuclearSpliceosomesAntigens, NeoplasmRibonucleoproteins, Small NuclearRibonucleoprotein, U4-U6 Small NuclearRNA-Binding ProteinsRNA, Small NuclearSART3 protein, humanU11-U12 small nuclear ribonucleoproteinU4 small nuclear RNAU6 small nuclear RNA

Identifiers

PMID14749385
PMCPMC344176
OpenAlexW2096581638

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.