Evidence map›Paper›PMID 14747573›Full record

ArticleJournal of virology2004

The human immunodeficiency virus type 1 ribosomal frameshifting site is an invariant sequence determinant and an important target for antiviral therapy.

Preetha Biswas, Xi Jiang, Annmarie L Pacchia, Joseph P Dougherty, Stuart W Peltz

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 97 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Under the Radar: Immune Evasion, Pathogenesis and Control of HIV Infection.International journal of molecular sciences · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. The conserved HIV-1 spacer peptide 2 triggers matrix lattice maturation.bioRxiv : the preprint server for biology · 2024
    Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Small Molecules Targeting Viral RNA.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Dynamic changes in tRNA modifications and abundance during T cell activation.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. The translational landscape of SARS-CoV-2 and infected cells.bioRxiv : the preprint server for biology · 2021
    Article
  18. Article
  19. Review
  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Preetha BiswasDepartment of Molecular Genetics, Microbiology and Immunology, Robert Wood Johnson Medical School-University of Medicine and Dentistry of New Jersey, Piscataway, New Jersey 08854, USA.
Xi Jiang
Annmarie L Pacchia
Joseph P Dougherty
Stuart W Peltz
PTC Therapeutics (United States) · US

Funding

HIV FRAMESHIFTING--FROM BIOLOGY TO THERAPEUTICSR01AI043886 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI PELTZ, STUART W · 1999 to 2003
$996k
A virus/cell based assay for discovery of anti-HIV drugsR42AI051910 · NIAID · PTC THERAPEUTICS, INC. · PI DOUGHERTY, JOSEPH · 2003 to 2004
$558k
A virus/cell based assay for discovery of anti-HIV drugsR41AI051910 · NIAID · PTC THERAPEUTICS, INC. · PI DOUGHERTY, JOSEPH · 2002 to 2002
$127k
HIV FRAMESHIFTING--FROM BIOLOGY TO THERAPEUTICSR21AI043886 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI PELTZ, STUART W · 1999 to 1999
–
NCI NIH HHS CA5077NIAID NIH HHS AI43886NIAID NIH HHS AI51910NIAID NIH HHS R41 AI051910NIAID NIH HHS R42 AI051910
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1) utilizes a distinctive form of gene regulation as part of its life cycle, termed programmed -1 ribosomal frameshifting, to produce the required ratio of the Gag and Gag-Pol polyproteins. We carried out a sequence comparison of 1,000 HIV-1 sequences at the slippery site (UUUUUUA) and found that the site is invariant, which is somewhat surprising for a virus known for its variability. This prompted us to prepare a series of mutations to examine their effect upon frameshifting and viral infectivity. Among the series of mutations were changes of the HIV-1 slippery site to those effectively utilized by other viruses, because such mutations would be anticipated to have a relatively mild effect upon frameshifting. The results demonstrate that any change to the slippery site reduced frameshifting levels and also dramatically inhibited infectivity. Because ribosomal frameshifting is essential for HIV-1 replication and it is surprisingly resistant to mutation, modulation of HIV-1 frameshifting efficiency potentially represents an important target for the development of novel antiviral therapeutics.

Indexed as

Frameshifting, RibosomalAnti-HIV AgentsBase SequenceCell LineFusion Proteins, gag-polGene Products, gagHeLa CellsHIV-1HumansMolecular Sequence DataMutationVirus ReplicationAnti-HIV AgentsFusion Proteins, gag-polGene Products, gag

Identifiers

PMID14747573
PMCPMC369415
OpenAlexW2075466475

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.