Evidence map›Paper›PMID 14742704›Full record

ArticleMolecular biology of the cell2004

Positive and negative regulation of a SNARE protein by control of intracellular localization.

Hideki Nakanishi, Pablo de los Santos, Aaron M Neiman

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Nir2 crystal structures reveal a phosphatidic acid-sensing mechanism at ER-PM contact sites.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Membrane and organelle rearrangement during ascospore formation in budding yeast.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  11. Meiotic Cytokinesis inJournal of fungi (Basel, Switzerland) · 2024
    Review
  12. Phosphatidic acid signaling and function in nuclei.Progress in lipid research · 2024
    Review
  13. Article
  14. Article
  15. When Phosphatases Go Mad: The Molecular Basis for Toxicity of Yeast Ppz1.International journal of molecular sciences · 2022
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hideki NakanishiDepartment of Biochemistry and Cell Biology and Institute for Cell and Developmental Biology, SUNY Stony Brook, Stony Brook, New York 11794-5215, USA.
Pablo de los Santos
Aaron M Neiman

Funding

REGULATION OF THE SECRETORY PATHWAY IN YEASTR01GM062184 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI NEIMAN, AARON M · 2001 to 2009
$2.5M
NIGMS NIH HHS GM-62184NIGMS NIH HHS R01 GM062184
6 · The paper itself

Abstract

In Saccharomyces cerevisiae, the developmentally regulated Soluble N-ethylmaleimide sensitive factor attachment protein receptor (SNARE) protein Spo20p mediates the fusion of vesicles with the prospore membrane, which is required for the formation of spores. Spo20p is subject to both positive and negative regulation by separate sequences in its aminoterminal domain. We report that the positive activity is conferred by a short, amphipathic helix that is sufficient to confer plasma membrane or prospore membrane localization to green fluorescent protein. In vitro, this helix binds to acidic phospholipids, and mutations that reduce or eliminate phospholipid binding in vitro inactivate Spo20p in vivo. Genetic manipulation of phospholipid pools indicates that the likely in vivo ligand of this domain is phosphatidic acid. The inhibitory activity is a nuclear targeting signal, which confers nuclear localization in vegetative cells and in cells entering meiosis. However, as cells initiate spore formation, fusions containing the inhibitory domain exit the nucleus and localize to the nascent prospore membrane. Thus, the SNARE Spo20p is both positively and negatively regulated by control of its intracellular localization.

Indexed as

Amino Acid SequenceCarrier ProteinsCell MembraneCloning, MolecularDNA PrimersEthylmaleimideFluorescent Antibody Technique, IndirectGalactoseGenotypeGlucoseGlutathione TransferaseGreen Fluorescent ProteinsLiposomesLuminescent ProteinsMembrane ProteinsMolecular Sequence DataCarrier ProteinsDNA PrimersEthylmaleimideGalactoseGlucoseGlutathione TransferaseGreen Fluorescent ProteinsLiposomesLuminescent ProteinsMembrane ProteinsPeptidesPhospholipidsPhospholipid Transfer ProteinsRecombinant Fusion ProteinsSNARE ProteinsVesicular Transport Proteins

Identifiers

PMID14742704
PMCPMC379277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.