Evidence map›Paper›PMID 14739656›Full record

ArticleVirus genes2004

Upregulation of LMP1 expression by histone deacetylase inhibitors in an EBV carrying NPC cell line.

Jun Nishikawa, Lorand L Kis, Anquan Liu, Xiangning Zhang, Miki Takahara, Kentaro Bandobashi, Csaba Kiss, Noemi Nagy, Kiwamu Okita, George Klein and 1 more

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Article in Virus genes, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Oncogenic Epstein-Barr virus recruits Nm23-H1 to regulate chromatin modifiers.Laboratory investigation; a journal of technical methods and pathology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Jun NishikawaMicrobiology and Tumor Biology Center, Karolinska Institute, S-171 77 Stockholm, Sweden.
Lorand L Kis
Anquan Liu
Xiangning Zhang
Miki Takahara
Kentaro Bandobashi
Csaba Kiss
Noemi Nagy
Kiwamu Okita
George Klein
Eva Klein
Yamaguchi University · JPKarolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesIn about 60% of Epstein-Barr virus (EBV) carrying nasopharyngeal carcinomas (NPC) LMP1 expressing cells can be detected. The frequency of LMP1 positive cells and the expression level varies from cell to cell in the different tumors. Cell lines derived from EBV positive NPCs loose the virus during in vitro culture. The in vitro infected NPC cell line TWO3-EBV used in our study carries the neomycin-resistance gene containing EBV and expresses low level of LMP1. With this cell line it was thus possible to study the regulation of LMP1 expression by modification of chromatin acetylation state. STUDY

designThe TWO-EBV cell line was treated with n -butyrate (NB) or trichostatin A (TSA).

resultsShown by immunoblotting, the LMP1 level was elevated in the treated samples. Already 2 h after TSA exposure LMP1 expression was higher and it increased up to 24 h. Immunofluorescence staining showed that nearly all cells were LMP1 positive. Neither EBNA2 nor BZLF1 were induced. Tested first 2 h after the treatment, acetylated histone H3 and H4 were already detectable, and their level increased up to 8 h. Chromatin immunoprecipitation (ChIP) verified that the LMP1-promoter (LMP1p) (ED-L1) was acetylated after TSA treatment.

conclusionEBV carrying epithelial cells do not express EBNA-2. We showed that LMP1 expression was upregulated by histone deacetylase inhibitors in an in vitro infected, EBV carrier NPC cell line.

Indexed as

Gene Expression Regulation, ViralHistone Deacetylase InhibitorsAcetylationButyratesCarcinomaDNAHerpesvirus 4, HumanHumansHydroxamic AcidsNasopharyngeal NeoplasmsPromoter Regions, GeneticRNA, MessengerUp-RegulationViral Matrix ProteinsButyratesDNAEBV-associated membrane antigen, Epstein-Barr virusHistone Deacetylase InhibitorsHydroxamic AcidsRNA, Messengertrichostatin AViral Matrix Proteins

Identifiers

PMID14739656
OpenAlexW2046292205

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.