Evidence map›Paper›PMID 14729983›Full record

ArticleMolecular and cellular biology2004

Transforming growth factor beta/Smad3 signaling regulates IRF-7 function and transcriptional activation of the beta interferon promoter.

Jing Qing, Cheng Liu, Lisa Choy, Rui-Yun Wu, Joseph S Pagano, Rik Derynck

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 73 citations in OpenAlex.

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  16. Betacoronavirus-specific alternate splicing.bioRxiv : the preprint server for biology · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Whole transcriptome analysis on blue light-induced eye damage.International journal of ophthalmology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jing QingDepartment of Growth and Development, Program in Cell Biology, University of California at San Francisco, San Francisco, California 94143, USA.
Cheng Liu
Lisa Choy
Rui-Yun Wu
Joseph S Pagano
Rik Derynck
University of California, San Francisco · USUniversity of North Carolina at Chapel Hill · US

Funding

TGF-Beta and Smad-mediated regulation of gene expressionR01CA063101 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DERYNCK, RIK M · 1995 to 2014
$6.4M
MECHANISMS OF TGF-BETA &SMAD SIGNALING IN ADIPOGENESISK01DK002877 · NIDDK · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI TOMLINSON, LISA C · 2000 to 2002
$259k
NCI NIH HHS CA63101NCI NIH HHS R01 CA063101NIDDK NIH HHS DK02877
6 · The paper itself

Abstract

The rapid induction of alpha interferon (IFN-alpha) and IFN-beta expression plays a critical role in the innate immune response against viral infection. We studied the effects of transforming growth factor beta (TGF-beta) and its intracellular effectors, the Smads, on the function of IRF-7, an essential transcription factor for IFN-alpha and -beta induction. IRF-7 interacted with Smads, and IRF-7, but not IRF-3, cooperated with Smad3 to activate IFN-beta transcription. This transcriptional cooperation occurred at the IRF-binding sequences in the IFN-beta promoter, and dominant-negative interference with TGF-beta receptor signaling and Smad3 function decreased IRF-7-mediated transcription. Furthermore, elimination of Smad3 expression in Smad3(-/-) fibroblasts delayed and decreased double-stranded RNA-induced expression of endogenous IFN-beta, whereas restoration of Smad3 expression enhanced IFN-beta induction. The IRF-7-Smad3 cooperativity resulted from the regulation of the transactivation activity of IRF-7 by Smad3, and dominant-negative interference with Smad3 function decreased IRF-7 activity. Consistent with the regulation by Smad3, the transcriptional activity of IRF-7 depended on and was regulated by TGF-beta signaling. Our studies underscore a role of TGF-beta/Smad3 signaling in IRF-7-mediated induction of IFN-beta expression.

Indexed as

Promoter Regions, GeneticAnimalsBinding SitesDNA-Binding ProteinsInterferon-betaInterferon Regulatory Factor-3Interferon Regulatory Factor-7MiceSignal TransductionSmad2 ProteinSmad3 ProteinTrans-ActivatorsTranscription FactorsTranscription, GeneticTransforming Growth Factor betaDNA-Binding ProteinsInterferon-betaInterferon Regulatory Factor-3Interferon Regulatory Factor-7Irf3 protein, mouseIrf7 protein, mouseSmad2 ProteinSmad2 protein, mouseSmad3 ProteinSmad3 protein, mouseTrans-ActivatorsTranscription FactorsTransforming Growth Factor beta

Identifiers

PMID14729983
PMCPMC321430
OpenAlexW2107486398

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.