Evidence map›Paper›PMID 14712232›Full record

ArticleOncogene2004

Mapping and characterization of the minimal internal ribosome entry segment in the human c-myc mRNA 5' untranslated region.

Sabrina Cencig, Cécile Nanbru, Shu-Yun Le, Cyril Gueydan, Georges Huez, Véronique Kruys

Abstract read
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In one paragraph

Article in Oncogene, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. The current status of vertebrate cellular mRNA IRESs.Cold Spring Harbor perspectives in biology · 2013
    Review
  6. Article
  7. Article
  8. Cap-independent translation of human SP-A 5'-UTR variants: a double-loop structure and cis-element contribution.American journal of physiology. Lung cellular and molecular physiology · 2009
    Article
  9. Article
  10. Article
  11. Article
  12. Searching for IRES.RNA (New York, N.Y.) · 2006
    Review
  13. A positive feedback vector for identification of nucleotide sequences that enhance translation.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Sabrina CencigLaboratoire de Chimie Biologique, Institut de Biologie et de Médecine Moléculaires, Université Libre de Bruxelles, rue des Profs Jeener et Brachet 12, 6041 Gosselies, Belgium.
Cécile Nanbru
Shu-Yun Le
Cyril Gueydan
Georges Huez
Véronique Kruys
Université Libre de Bruxelles · BENational Cancer Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human c-myc proto-oncogene is transcribed from four alternative promoters generating transcripts with 5' untranslated regions of various lengths. These transcripts encode two proteins, c-Myc1 and c-Myc2, from two initiation codons, CUG and AUG, respectively. We and others have previously demonstrated that the region of c-myc transcripts between nucleotides (nt) -363 and -94 upstream from the CUG start codon contained an internal ribosome entry site leading to the cap-independent translation of c-myc open reading frames (ORFs). Here, we mapped a 50-nt sequence (-143 -94), which is sufficient to promote internal translation initiation of c-myc ORFs. Interestingly, this 50-nt element can be further dissected into two segments of 14 nt, each capable of activating internal translation initiation. We also demonstrate that this 50-nt element acts as the ribosome landing site from which the preinitiation ribosomal complex scans the mRNA until the CUG or AUG start codons.

Indexed as

Genes, mycProtein Biosynthesis5' Untranslated RegionsCodon, InitiatorHumansNucleic Acid ConformationProto-Oncogene MasRibosomesRNA, Messenger5' Untranslated RegionsCodon, InitiatorMAS1 protein, humanProto-Oncogene MasRNA, Messenger

Identifiers

PMID14712232
OpenAlexW2008372732

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.