Evidence map›Paper›PMID 14702304›Full record

ArticleJournal of bacteriology2004

Helicobacter acinonychis: genetic and rodent infection studies of a Helicobacter pylori-like gastric pathogen of cheetahs and other big cats.

Daiva Dailidiene, Giedrius Dailide, Keiji Ogura, Maojun Zhang, Asish K Mukhopadhyay, Kathryn A Eaton, Giovanni Cattoli, Johannes G Kusters, Douglas E Berg

Abstract read
In one paragraph

Article in Journal of bacteriology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Flavodoxins as Novel Therapeutic Targets againstInternational journal of molecular sciences · 2020
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Comparative genomics of Helicobacter pylori.World journal of gastroenterology · 2009
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Pathogenesis of Helicobacter pylori infection.Clinical microbiology reviews · 2006
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Daiva DailidieneDepartment of Molecular Microbiology, Washington University Medical School, St. Louis, Missouri 63110, USA.
Giedrius Dailide
Keiji Ogura
Maojun Zhang
Asish K Mukhopadhyay
Kathryn A Eaton
Giovanni Cattoli
Johannes G Kusters
Douglas E Berg

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
HOST AND BACTERIAL FACTORS IN DISEASE DUE TO H PYLORIR01AI043643 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI EATON, KATHRYN A. · 1998 to 2010
$2.1M
The Risk of Developing Alzheimer’s Disease and Related Dementias Associated with Hypertension, Diabetes, and Drug Therapies for Cancer: Up to 30-year Follow-up for Older Medicare BeneficiariesR01AG067498 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DU, XIANGLIN · 2020 to 2024
$1.6M
H.PYLORI POPULATION GENETICS AND GENOME EVOLUTIONR01DK063041 · NIDDK · WASHINGTON UNIVERSITY · PI BERG, DOUGLAS EUGENE · 2003 to 2007
$1.6M
H. PYLORI INFECTION AND GI DISEASE IN ALASKA NATIVESR01DK053727 · NIDDK · WASHINGTON UNIVERSITY · PI BERG, DOUGLAS EUGENE · 1999 to 2003
$1.3M
DRUG RESISTANCE AND GENE TRANSFER IN H PYLORIR01AI038166 · NIAID · WASHINGTON UNIVERSITY · PI BERG, DOUGLAS EUGENE · 1995 to 2003
$1.1M
HELICOBACTER GASTRITIS AND GASTRIC CARCINOMAR01CA067498 · NCI · OHIO STATE UNIVERSITY · PI EATON, KATHRYN A · 1995 to 1998
–
NCI NIH HHS R01 CA67498NIAID NIH HHS AI38166NIAID NIH HHS R01 AI043643NIAID NIH HHS R01 AI43643NIA NIH HHS R01 AG067498NIDDK NIH HHS DK53727NIDDK NIH HHS DK63041NIDDK NIH HHS P30 DK052574NIDDK NIH HHS P30 DK52574NIDDK NIH HHS R01 DK063041
6 · The paper itself

Abstract

Insights into bacterium-host interactions and genome evolution can emerge from comparisons among related species. Here we studied Helicobacter acinonychis (formerly H. acinonyx), a species closely related to the human gastric pathogen Helicobacter pylori. Two groups of strains were identified by randomly amplified polymorphic DNA fingerprinting and gene sequencing: one group from six cheetahs in a U.S. zoo and two lions in a European circus, and the other group from a tiger and a lion-tiger hybrid in the same circus. PCR and DNA sequencing showed that each strain lacked the cag pathogenicity island and contained a degenerate vacuolating cytotoxin (vacA) gene. Analyses of nine other genes (glmM, recA, hp519, glr, cysS, ppa, flaB, flaA, and atpA) revealed a approximately 2% base substitution difference, on average, between the two H. acinonychis groups and a approximately 8% difference between these genes and their homologs in H. pylori reference strains such as 26695. H. acinonychis derivatives that could chronically infect mice were selected and were found to be capable of persistent mixed infection with certain H. pylori strains. Several variants, due variously to recombination or new mutation, were found after 2 months of mixed infection. H. acinonychis ' modest genetic distance from H. pylori, its ability to infect mice, and its ability to coexist and recombine with certain H. pylori strains in vivo should be useful in studies of Helicobacter infection and virulence mechanisms and studies of genome evolution.

Indexed as

AcinonyxAnimalsAntigens, BacterialBacterial ProteinsFlagellinHelicobacterHelicobacter InfectionsLionsMiceMice, Inbred BALB CMice, Inbred C57BLPhylogenyAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pyloriflaA protein, bacteriaflaB flagellinFlagellinVacA protein, Helicobacter pylori

Identifiers

PMID14702304
PMCPMC305740

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.