Evidence map›Paper›PMID 14701878›Full record

ArticleGenes & development2004

hRIP, a cellular cofactor for Rev function, promotes release of HIV RNAs from the perinuclear region.

Nuria Sánchez-Velar, Enyeneama B Udofia, Zhong Yu, Maria L Zapp

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 81 citations in OpenAlex.

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  18. Detection of viral RNA by fluorescence in situ hybridization (FISH).Journal of visualized experiments : JoVE · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nuria Sánchez-VelarUniversity of Massachusetts Medical School, Program in Molecular Medicine and the UMASS Center for AIDS Research (CFAR), Worcester, Massachusetts 01605, USA.
Enyeneama B Udofia
Zhong Yu
Maria L Zapp
University of Massachusetts Chan Medical School · US

Funding

UMASS MEDICAL CENTER FOR AIDS RESEARCHP30AI042845 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 1998 to 2012
$13.0M
MOLECULAR INTERACTIONS BETWEEN REV AND CELLULAR FACTORSR01AI043208 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ZAPP, MARIA L. · 1998 to 2010
$2.1M
NIAID NIH HHS 5P30 AI42845NIAID NIH HHS 5R01 AI43208NIAID NIH HHS P30 AI042845NIAID NIH HHS R01 AI043208
6 · The paper itself

Abstract

Human immunodeficiency virus Rev facilitates the cytoplasmic accumulation of viral RNAs that contain a Rev binding site. A human Rev-interacting protein (hRIP) was originally identified based on its ability to interact with the Rev nuclear export signal (NES) in yeast two-hybrid assays. To date, however, the function of hRIP and a role for hRIP in Rev-directed RNA export have remained elusive. Here we ablate hRIP activity with a dominant-negative mutant or RNA interference and analyze Rev function by RNA in situ hybridization. We find, unexpectedly, that in the absence of functional hRIP, Rev-directed RNAs mislocalize and aberrantly accumulate at the nuclear periphery, where hRIP is localized. In contrast, in the absence of Rev or the Rev cofactor CRM1, Rev-directed RNAs remain nuclear. We further show that the RNA mislocalization pattern resulting from loss of hRIP activity is highly specific to Rev function: the intracellular distribution of cellular poly(A)(+) mRNA, nuclear proteins, and, most important, NES-containing proteins, are unaffected. Thus, hRIP is an essential cellular Rev cofactor, which acts at a previously unanticipated step in HIV-1 RNA export: movement of RNAs from the nuclear periphery to the cytoplasm.

Indexed as

AnimalsBase SequenceCell LineCell NucleusChlorocebus aethiopsCOS CellsDNA, ComplementaryFluorescent Antibody TechniqueGene Products, revHeLa CellsHIV-1HumansIn Situ HybridizationNuclear Pore Complex ProteinsPolymerase Chain ReactionRecombinant ProteinsAGFG1 protein, humanDNA, ComplementaryGene Products, revNuclear Pore Complex ProteinsRecombinant Proteinsrev Gene Products, Human Immunodeficiency VirusRNA-Binding ProteinsRNA, Small InterferingRNA, Viral

Identifiers

PMID14701878
PMCPMC314270
OpenAlexW2119451435

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.