Evidence map›Paper›PMID 14701877›Full record

ArticleGenes & development2003

Post-transcriptional regulation of the E/Daughterless ortholog HLH-2, negative feedback, and birth order bias during the AC/VU decision in C. elegans.

Xantha Karp, Iva Greenwald

Abstract read
In one paragraph

Article in Genes & development, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
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  9. Article
  10. Floxed exon (Flexon): A flexibly positioned stop cassette for recombinase-mediated conditional gene expression.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Deletion of a putative HDA-1 binding site in themicroPublication biology · 2021
    Article
  15. Positive autoregulation ofDevelopment (Cambridge, England) · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Making lineage decisions with biological noise: Lessons from the early mouse embryo.Wiley interdisciplinary reviews. Developmental biology · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Xantha KarpDepartment of Genetics and Development, Columbia University, College of Physicians and Surgeons, New York, NY 10032, USA.
Iva Greenwald

Funding

PREDOCTORAL TRAINING GRANT IN HUMAN GENETICS &DEVELOPMET32GM007088 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SHEN, MICHAEL M. · 1985 to 2020
$7.1M
Genes that influence LIN-12/Notch Activity in C. elegansR01CA095389 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GREENWALD, IVA S · 2003 to 2012
$1.6M
C LEGANS MODEL FOR ALZHEIMERS DISEASER01NS035556 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GREENWALD, IVA S. · 1996 to 2000
$200k
NCI NIH HHS CA 095389NCI NIH HHS R01 CA095389NIGMS NIH HHS GM 07088NIGMS NIH HHS T32 GM007088NINDS NIH HHS NS 35556
6 · The paper itself

Abstract

The anchor cell/ventral uterine precursor cell (AC/VU) decision in Caenorhabditis elegans is a canonical example of lin-12/Notch-mediated lateral specification. Two initially equivalent cells interact via the receptor LIN-12 and its ligand LAG-2, so that one becomes the AC and the other a VU. During this interaction, feedback loops amplify a small difference in lin-12 activity, limiting lin-12 transcription to the presumptive VU and lag-2 transcription to the presumptive AC. Here, we find that hlh-2 appears to be required for the VU fate and directly activates lag-2 transcription in the presumptive AC. HLH-2 appears to accumulate selectively in the presumptive AC prior to differential transcription of lin-12 or lag-2, and is therefore the earliest detectable difference between the two cells undergoing the AC/VU decision. The restricted accumulation of HLH-2 to the presumptive AC reflects post-transcriptional down-regulation of HLH-2 in the presumptive VU. Our observations suggest that hlh-2 is regulated as part of the negative feedback that down-regulates lag-2 transcription in the presumptive VU. Finally, we show that the AC/VU decision in an individual hermaphrodite is biased by the relative birth order of the two cells, so that the first-born cell is more likely to become the VU. We propose models to suggest how birth order, HLH-2 accumulation, and transcription of lag-2 may be linked during the AC/VU decision.

Indexed as

Feedback, PhysiologicalTranscription, GeneticAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDown-RegulationFemaleFluorescent Antibody TechniqueGene Expression Regulation, DevelopmentalGenes, ReporterHelix-Loop-Helix MotifsMembrane ProteinsMutationReceptors, NotchSignal TransductionUterusCaenorhabditis elegans Proteinslag-2 protein, C elegansLin-12 protein, C elegansMembrane ProteinsReceptors, Notch

Identifiers

PMID14701877
PMCPMC305261

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.