Evidence map›Paper›PMID 14701874›Full record

ArticleGenes & development2003

SUMO modification of a novel MAR-binding protein, SATB2, modulates immunoglobulin mu gene expression.

Gergana Dobreva, Julia Dambacher, Rudolf Grosschedl

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 143 papers.

0numbers the graph read from it
0cells of the map it votes in
143citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

143 citing papers in PubMed, 262 citations in OpenAlex.

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  20. Genetic analysis of a child withExperimental and therapeutic medicine · 2023
    Article

83 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Gergana DobrevaGene Center and Institute of Biochemistry, University of Munich, Munich 81377, Germany.
Julia Dambacher
Rudolf Grosschedl

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear matrix attachment regions (MARs) are regulatory DNA sequences that are important for higher-order chromatin organization, long-range enhancer function, and extension of chromatin modifications. Here we characterize a novel cell type-specific MAR-binding protein, SATB2, which binds to the MARs of the endogenous immunoglobulin micro locus in pre-B cells and enhances gene expression. We found that SATB2 differs from the closely related thymocyte-specific protein SATB1 by modifications of two lysines with the small ubiquitive related modifier (SUMO), which are augmented specifically by the SUMO E3 ligase PIAS1. Mutations of the SUMO conjugation sites of SATB2 enhance its activation potential and association with endogenous MARs in vivo, whereas N-terminal fusions with SUMO1 or SUMO3 decrease SATB2-mediated gene activation. Sumoylation is also involved in targeting SATB2 to the nuclear periphery, raising the possibility that this reversible modification of a MAR-binding protein may contribute to the modulation of subnuclear DNA localization.

Indexed as

Gene Expression RegulationB-LymphocytesCell NucleusChromatinElectrophoretic Mobility Shift AssayGreen Fluorescent ProteinsHumansImmunoglobulin mu-ChainsLuminescent ProteinsMatrix Attachment Region Binding ProteinsMatrix Attachment RegionsMolecular Sequence DataMutationNuclear MatrixPlasmidsProtein Inhibitors of Activated STATChromatinGreen Fluorescent ProteinsImmunoglobulin mu-ChainsLuminescent ProteinsMatrix Attachment Region Binding ProteinsProtein Inhibitors of Activated STATProteinsSmall Ubiquitin-Related Modifier Proteins

Identifiers

PMID14701874
PMCPMC305257
OpenAlexW2157494005

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.