Evidence map›Paper›PMID 14701746›Full record

ArticleMolecular and cellular biology2004

Molecular signatures of self-renewal, differentiation, and lineage choice in multipotential hemopoietic progenitor cells in vitro.

Ludovica Bruno, Reinhard Hoffmann, Fraser McBlane, John Brown, Rajeev Gupta, Chirag Joshi, Stella Pearson, Thomas Seidl, Clare Heyworth, Tariq Enver

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Review
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  6. Review
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  14. Modeling and visualizing cell type switching.Computational and mathematical methods in medicine · 2014
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. On emerging nuclear order.The Journal of cell biology · 2011
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ludovica BrunoSection of Gene Function and Regulation, The Institute of Cancer Research, London SW3 6JB, UK.
Reinhard Hoffmann
Fraser McBlane
John Brown
Rajeev Gupta
Chirag Joshi
Stella Pearson
Thomas Seidl
Clare Heyworth
Tariq Enver

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The molecular mechanisms governing self-renewal, differentiation, and lineage specification remain unknown. Transcriptional profiling is likely to provide insight into these processes but, as yet, has been confined to "static" molecular profiles of stem and progenitors cells. We now provide a comprehensive, statistically robust, and "dynamic" analysis of multipotent hemopoietic progenitor cells undergoing self-renewal in response to interleukin-3 (IL-3) and multilineage differentiation in response to lineage-affiliated cytokines. Cells undergoing IL-3-dependent proliferative self-renewal displayed striking complexity, including expression of genes associated with different lineage programs, suggesting a highly responsive compartment poised to rapidly execute intrinsically or extrinsically initiated cell fate decisions. A remarkable general feature of early differentiation was a resolution of complexity through the downregulation of gene expression. Although effector genes characteristic of mature cells were upregulated late, coincident with morphological changes, lineage-specific changes in gene expression were observed prior to this, identifying genes which may provide early harbingers of unilineage commitment. Of particular interest were genes that displayed differential behavior irrespective of the lineage elaborated, many of which were rapidly downregulated within 4 to 8 h after exposure to a differentiation cue. These are likely to include genes important in self-renewal, the maintenance of multipotentiality, or the negative regulation of differentiation per se.

Indexed as

AnimalsCell DifferentiationCell DivisionCells, CulturedGene Expression ProfilingGene Expression Regulation, DevelopmentalHematopoiesisHematopoietic Cell Growth FactorsHematopoietic Stem CellsInterleukin-3In Vitro TechniquesMiceMultipotent Stem CellsOligonucleotide Array Sequence AnalysisSignal TransductionHematopoietic Cell Growth FactorsInterleukin-3

Identifiers

PMID14701746
PMCPMC343787

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.