Evidence map›Paper›PMID 1468649›Full record

ArticleGenetica1992

The intracisternal A particle derived solo LTR promoter of the rat oncomodulin gene is not present in the mouse gene.

D Banville, M Rotaru, Y Boie

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Genetica, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

  1. Oncomodulin: The Enigmatic Parvalbumin Protein.Frontiers in molecular neuroscience · 2019
    Article
  2. Review
  3. Article
  4. Structure and chromosomal localization of the mouse oncomodulin gene.Mammalian genome : official journal of the International Mammalian Genome Society · 1995
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

D BanvilleNational Research Council of Canada, Biotechnology Research Institute, Montreal, Quebec.
M Rotaru
Y Boie
Biotechnology Research Institute · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rat gene encoding oncomodulin, a small calcium-binding protein related to parvalbumin, is under the control of a solo long terminal repeat (LTR) derived from an endogenous intracisternal A-particle (IAP). This gene was the first example of a mammalian gene regulated in normal cells by a promoter of retroviral origin (see also article by D. Robins and L. Samuelson in this volume). We show here that the oncomodulin LTR is a member of a small subset of sequence related solo LTR elements present in the rat genome and that a full length IAP genome containing LTRs of this type is no longer present in the rat genome. We have assayed the transcriptional activity of the oncomodulin LTR coupled to the human growth hormone gene as a reporter. Transfections in both Hela cells and 293 cells indicate the oncomodulin LTR promoter is sufficient to efficiently initiate transcription. In 293 cells (human embryo kidney cells transformed with human adenovirus type 5 DNA), the oncomodulin LTR is a strong promoter, capable of bidirectional transcription. Finally, we have determined the structure and the sequence of the mouse oncomodulin gene. Our results suggest that the integration of the IAP particle genome within the rat oncomodulin gene occurred after the rat and the mouse became distinct species.

Indexed as

Genes, Intracisternal A-ParticlePromoter Regions, GeneticRepetitive Sequences, Nucleic AcidAmino Acid SequenceAnimalsBase SequenceCalcium-Binding ProteinsCell Line, TransformedGenesHumansMiceMolecular Sequence DataPhylogenyRatsSequence AlignmentSequence Homology, Nucleic AcidCalcium-Binding Proteinsoncomodulin

Identifiers

PMID1468649
OpenAlexW2081744644

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.