ArticleNucleic acids research2004
The European ribosomal RNA database.
Article in Nucleic acids research, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
111 citing papers in PubMed, 265 citations in OpenAlex.
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- A prospective longitudinal study on the microbiota composition in amyotrophic lateral sclerosis.BMC medicine · 2020Article
- Intestinal bacteria detected in cancer and adjacent tissue from patients with colorectal cancer.Oncology letters · 2019Article
- Redescription of Henneguya chaudhuryi (Bajpai & Haldar, 1982) (Myxosporea: Myxobolidae), infecting the gills of the freshwater fish Channa punctata (Bloch) (Perciformes: Channidae) in India.Systematic parasitology · 2017Article
- Development of a PCR-free DNA-based assay for the specific detection of Vibrio species in environmental samples by targeting the 16S rRNA.Environmental science and pollution research international · 2017Article
- Sensitivity of Ribosomal RNA Character Sampling in the Phylogeny of Rhabditida.Journal of nematology · 2015Article
- Draft Genome Sequence and Gene Annotation of Stemphylium lycopersici Strain CIDEFI-216.Genome announcements · 2015Article
- Origin and higher-level diversification of acariform mites - evidence from nuclear ribosomal genes, extensive taxon sampling, and secondary structure alignment.BMC evolutionary biology · 2015Article
- New Comparative Analysis Based on the Secondary Structure of SSU-rRNA Gene Reveals the Evolutionary Trend and the Family-Genus Characters of Mobilida (Ciliophora, Peritrichia).Current microbiology · 2015Article
- Genomewide comparison and novel ncRNAs of Aquificales.BMC genomics · 2014Article
- Land use type significantly affects microbial gene transcription in soil.Microbial ecology · 2014Article
- Identification of a dinucleotide signature that discriminates coding from non-coding long RNAs.Frontiers in genetics · 2014Article
- Abundance and novel lineages of thraustochytrids in Hawaiian waters.Microbial ecology · 2013Article
- A heterozygous moth genome provides insights into herbivory and detoxification.Nature genetics · 2013Article
- Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean Sea.MicrobiologyOpen · 2013Article
- Article
51 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The European ribosomal RNA database aims to compile all complete or nearly complete ribosomal RNA sequences from both the small (SSU) and large (LSU) ribosomal subunits. All sequences are available in aligned format. Sequence alignment is based on the secondary structure of the molecules, as determined by comparative sequence analysis. Additional information about the sequences, such as taxonomic classification of the organism from which they have been obtained, and literature references are also provided. In order to identify the closest relatives to newly determined sequences, BLAST searches can be performed, after which the best matching sequences are aligned and a phylogenetic tree is inferred. As of 2003, the European ribosomal RNA database is maintained at Ghent University (Belgium). The database can be consulted at http://www.psb.ugent.be/rRNA/.
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.