Evidence map›Paper›PMID 14673644›Full record

ArticleHuman genetics2004

Localized aggressive periodontitis is linked to human chromosome 1q25.

Yefu Li, Lin Xu, Hatice Hasturk, Alpdogan Kantarci, Steven R DePalma, Thomas E Van Dyke

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Human genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 55 citations in OpenAlex.

  1. Trial
  2. Article
  3. Associations ofJDR clinical and translational research · 2019
    Article
  4. Article
  5. Review
  6. Epigenetic biomarkers: a step forward for understanding periodontitis.Journal of periodontal & implant science · 2013
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yefu LiDepartment of Oral and Developmental Biology, Harvard School of Dental Medicine, 180 Longwood Avenue, Boston, MA 02115, USA. yefu_li@hms.harvard.edu
Lin Xu
Hatice Hasturk
Alpdogan Kantarci
Steven R DePalma
Thomas E Van Dyke
Boston University · USHarvard University · US

Funding

Novel anti-inflamatory lipid mediatorsP01DE013499 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SERHAN, CHARLES NICHOLAS · 2000 to 2004
$5.3M
NIDCR NIH HHS P01 DE 13499OCPHP CDC HHS M01-PR00533
6 · The paper itself

Abstract

Localized aggressive periodontitis (LAP; previously known as localized juvenile periodontitis) is one of the rapidly progressive periodontal diseases. Certain forms of familial LAP show a simple Mendelian pattern of transmission. However, no gene mutation has been identified to be responsible for the LAP phenotype. As an initial step to identify a gene mutation associated with LAP, we have performed genetic linkage analysis with four multigenerational families exhibiting the LAP phenotype. Affected individuals in the families were identified based on clinical and laboratory criteria in an attempt to define a homogeneous phenotype, since the clinical presentation of LAP may represent a manifestation of a heterogeneous group of diseases. The LAP phenotype is linked to a DNA marker, D1S492, with LOD score 3.48, theta=0.00. The haplotype analysis of the chromosome interval associated with D1S492 indicates that a LAP locus is located between D1S196 and D1S533 on chromosome 1, covering about 26 million DNA basepairs. We have also examined the DNA sequence of prostaglandin-endoperoxide synthase 2 (PTGS2 or cyclooxygenase 2, COX2) since prostaglandin 2 (PGE2), the product of COX2, is upregulated in LAP patients and COX2 is located between D1S196 and D1S533. No mutation in COX2 was identified in the patients.

Indexed as

Chemotaxis, LeukocyteChromosomes, Human, Pair 1Genetic LinkageBase SequenceBlack PeopleCells, CulturedFemaleHaplotypesHumansMaleNeutrophilsOdds RatioPeriodontitisPolymerase Chain ReactionSuperoxidesSuperoxides

Identifiers

PMID14673644
OpenAlexW2079425803

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.