Evidence map›Paper›PMID 14671124›Full record

ArticleJournal of virology2004

The Rep protein of adeno-associated virus type 2 interacts with single-stranded DNA-binding proteins that enhance viral replication.

Travis H Stracker, Geoffrey D Cassell, Peter Ward, Yueh-Ming Loo, Bas van Breukelen, Stacy D Carrington-Lawrence, Robert K Hamatake, Peter C van der Vliet, Sandra K Weller, Thomas Melendy and 1 more

Abstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. The adenovirus DNA-binding protein DBP.Journal of virology · 2024
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Strategies to improve safety profile of AAV vectors.Frontiers in molecular medicine · 2022
    Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Travis H StrackerLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Geoffrey D Cassell
Peter Ward
Yueh-Ming Loo
Bas van Breukelen
Stacy D Carrington-Lawrence
Robert K Hamatake
Peter C van der Vliet
Sandra K Weller
Thomas Melendy
Matthew D Weitzman

Funding

GENETICS OF HSV DNA REPLICATIONR01AI021747 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI WELLER, SANDRA K, WRIGHT, DENNIS L. · 1985 to 2024
$9.9M
GENETICS OF HSV DNA REPLICATIONR37AI021747 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI WELLER, SANDRA K · 1998 to 2007
$3.3M
Interactions of AAV with Cellular FactorsR01AI051686 · NIAID · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI WEITZMAN, MATTHEW D. · 2002 to 2006
$1.9M
INITIAL STEPS IN RAAV TRANSDUCTIONR01AI043341 · NIAID · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI WEITZMAN, MATTHEW D. · 2000 to 2003
$1.2M
HPV DNA REPLICATION: NOVEL HOST FACTORSK02AI001686 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MELENDY, THOMAS · 1999 to 2003
$421k
PAPILLOMAVIRUS DNA REPLICATION--HOST CELL FACTORSR29GM056406 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MELENDY, THOMAS · 1997 to 2001
$226k
NIAID NIH HHS AI01686NIAID NIH HHS AI21747NIAID NIH HHS AI43341NIAID NIH HHS AI51686NIAID NIH HHS R01 AI021747NIAID NIH HHS R01 AI051686NIAID NIH HHS R37 AI021747NIGMS NIH HHS GM56406NIGMS NIH HHS R29 GM056406
6 · The paper itself

Abstract

Adeno-associated virus (AAV) type 2 is a human parvovirus whose replication is dependent upon cellular proteins as well as functions supplied by helper viruses. The minimal herpes simplex virus type 1 (HSV-1) proteins that support AAV replication in cell culture are the helicase-primase complex of UL5, UL8, and UL52, together with the UL29 gene product ICP8. We show that AAV and HSV-1 replication proteins colocalize at discrete intranuclear sites. Transfections with mutant genes demonstrate that enzymatic functions of the helicase-primase are not essential. The ICP8 protein alone enhances AAV replication in an in vitro assay. We also show localization of the cellular replication protein A (RPA) at AAV centers under a variety of conditions that support replication. In vitro assays demonstrate that the AAV Rep68 and Rep78 proteins interact with the single-stranded DNA-binding proteins (ssDBPs) of Ad (Ad-DBP), HSV-1 (ICP8), and the cell (RPA) and that these proteins enhance binding and nicking of Rep proteins at the origin. These results highlight the importance of intranuclear localization and suggest that Rep interaction with multiple ssDBPs allows AAV to replicate under a diverse set of conditions.

Indexed as

Virus ReplicationAnimalsCell LineChlorocebus aethiopsDependovirusDNA-Binding ProteinsDNA, Single-StrandedHeLa CellsHerpesvirus 1, HumanHumansTransfectionVero CellsViral ProteinsDNA-Binding ProteinsDNA, Single-StrandedICP8 protein, Simplexvirusrep proteins, Adeno-associated virus 2Viral Proteins

Identifiers

PMID14671124
PMCPMC303412

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.