Evidence map›Paper›PMID 14671091›Full record

ArticleJournal of virology2004

Human immunodeficiency virus type 1 superinfection was not detected following 215 years of injection drug user exposure.

Rose Tsui, Belinda L Herring, Jason D Barbour, Robert M Grant, Peter Bacchetti, Alex Kral, Brian R Edlin, Eric L Delwart

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 76 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Frequency and implications of HIV superinfection.The Lancet. Infectious diseases · 2013
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. A Multi-Vector, Multi-Envelope HIV-1 Vaccine.The journal of pediatric pharmacology and therapeutics : JPPT : the official journal of PPAG · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Rose TsuiBlood Systems Research Institute, University of California, San Francisco, San Francisco, California, USA.
Belinda L Herring
Jason D Barbour
Robert M Grant
Peter Bacchetti
Alex Kral
Brian R Edlin
Eric L Delwart
Blood Systems Research Institute · USGladstone Institutes · USCornell University · USUniversity of California, San Francisco · US

Funding

NIAID NIH HHS AI-447320ODCDC CDC HHS U64/CCU917889-01
6 · The paper itself

Abstract

Evidence for human immunodeficiency virus type 1 (HIV-1) superinfection was sought among 37 HIV-1-positive street-recruited active injection drug users (IDUs) from the San Francisco Bay area. HIV-1 sequences from pairs of samples collected 1 to 12 years apart, spanning a total of 215 years of exposure, were generated at p17 gag, the V3-V5 region of env, and/or the first exon of tat and phylogenetically analyzed. No evidence of HIV-1 superinfection was detected in which a highly divergent HIV-1 variant emerged at a frequency >20% of the serum viral quasispecies. Based on the reported risk behavior of the IDUs and the HIV-1 incidence in uninfected subjects in the same cohort, a total of 3.4 new infections would have been expected if existing infection conferred no protection from superinfection. Adjusted for risk behaviors, the estimated relative risk of superinfection compared with initial infection was therefore 0.0 (95% confidence interval, 0.00, 0.79; P = 0.02), indicating that existing infection conferred a statistically significant level of protection against superinfection with an HIV-1 strain of the same subtype, which was between 21 and 100%.

Indexed as

SuperinfectionViral ProteinsAdultFemalegag Gene Products, Human Immunodeficiency VirusGene Products, envGene Products, gagGene Products, tatHIV-1HIV AntigensHIV InfectionsHumansMaleMolecular Sequence DataPhylogenySequence Analysis, DNAgag Gene Products, Human Immunodeficiency VirusGene Products, envGene Products, gagGene Products, tatHIV Antigensp17 protein, Human Immunodeficiency Virus Type 1tat Gene Products, Human Immunodeficiency VirusViral Proteins

Identifiers

PMID14671091
PMCPMC303392
OpenAlexW2033802557

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.