Evidence map›Paper›PMID 14671020›Full record

ArticleThe Plant cell2004

SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis.

Eric Lalanne, David Honys, Andrew Johnson, Georg H H Borner, Kathryn S Lilley, Paul Dupree, Ueli Grossniklaus, David Twell

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 197 citations in OpenAlex.

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  14. Characterization ofFrontiers in plant science · 2022
    Article
  15. Interference of ArabidopsisFrontiers in plant science · 2022
    Article
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  19. Population genomics of Mediterranean oat (A. sativa) reveals high genetic diversity and three loci for heading date.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  20. Review

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 4 countries.

Eric LalanneDepartment of Biology, University of Leicester, Leicester LE1 7RH, United Kingdom.
David Honys
Andrew Johnson
Georg H H Borner
Kathryn S Lilley
Paul Dupree
Ueli Grossniklaus
David Twell
University of Leicester · GBUniversity of Cambridge · GBUniversity of Zurich · CH

Funding

Biotechnology and Biological Sciences Research Council BBS/B/10684
6 · The paper itself

Abstract

Glycosylphosphatidylinositol (GPI) anchoring provides an alternative to transmembrane domains for anchoring proteins to the cell surface in eukaryotes. GPI anchors are synthesized in the endoplasmic reticulum via the sequential addition of monosaccharides, fatty acids, and phosphoethanolamines to phosphatidylinositol. Deficiencies in GPI biosynthesis lead to embryonic lethality in animals and to conditional lethality in eukaryotic microbes by blocking cell growth, cell division, or morphogenesis. We report the genetic and phenotypic analysis of insertional mutations disrupting SETH1 and SETH2, which encode Arabidopsis homologs of two conserved proteins involved in the first step of the GPI biosynthetic pathway. seth1 and seth2 mutations specifically block male transmission and pollen function. This results from reduced pollen germination and tube growth, which are associated with abnormal callose deposition. This finding suggests an essential role for GPI anchor biosynthesis in pollen tube wall deposition or metabolism. Using transcriptomic and proteomic approaches, we identified 47 genes that encode potential GPI-anchored proteins that are expressed in pollen and demonstrated that at least 11 of these proteins are associated with pollen membranes by GPI anchoring. Many of the identified candidate proteins are homologous with proteins involved in cell wall synthesis and remodeling or intercellular signaling and adhesion, and they likely play important roles in the establishment and maintenance of polarized pollen tube growth.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsCell WallFertilityFlowersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGlycosylphosphatidylinositolsMembrane ProteinsMolecular Sequence DataMutagenesis, InsertionalMutationPollenSequence Homology, Amino AcidSignal TransductionArabidopsis ProteinsGlycosylphosphatidylinositolsMembrane Proteinsphosphatidylinositol glycan-class A proteinSETH1 protein, ArabidopsisSETH2 protein, Arabidopsis

Identifiers

PMID14671020
PMCPMC301407
OpenAlexW2143988500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.