Evidence map›Paper›PMID 14668358›Full record

ArticleGenetics2003

Evolution in Saccharomyces cerevisiae: identification of mutations increasing fitness in laboratory populations.

Victoria M Blanc, Julian Adams

Abstract read
In one paragraph

Article in Genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Comparing whole genomes using DNA microarrays.Nature reviews. Genetics · 2008
    Review
  10. Article
  11. Article
  12. Loss of dispensable genes is not adaptive in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Victoria M BlancDepartment of Biology, University of Michigan, Ann Arbor, Michigan 48109-1048, USA.
Julian Adams

Funding

University of Michigan Training Program in Genomic ScienceT32HG000040 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Sebastian Zoellner · 1995 to 2026
$16.4M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
Ciprofloxacin resistance and compensatory Mutations.R21AI055756 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ADAMS, JULIAN P. · 2003 to 2004
$458k
NHGRI NIH HHS 5-T32 HG00040NIAID NIH HHS AI55756NIGMS NIH HHS 5 T32 GM07544
6 · The paper itself

Abstract

Since the publication of the complete sequence of the genome of Saccharomyces cerevisiae, a number of comprehensive investigations have been initiated to gain insight into cellular function. The focus of these studies has been to identify genes essential for survival in specific environments or those that when mutated cause gross phenotypic defects in growth. Here we describe Ty1-based mutational approaches designed to identify genes, which when mutated generate evolutionarily significant phenotypes causing small but positive increments on fitness. As expected, Ty1 mutations with a positive fitness effect were in the minority. However, mutations in two loci, one inactivating FAR3 and one upstream of CYR1, identified in evolving populations, were shown to have small but significantly positive fitness effects.

Indexed as

Biological EvolutionMutationAmino Acid SequenceBase SequenceDNA, FungalDNA PrimersGenetic VariationMolecular Sequence DataSaccharomyces cerevisiaeSequence Homology, Nucleic AcidDNA, FungalDNA Primers

Identifiers

PMID14668358
PMCPMC1462841

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.