Evidence map›Paper›PMID 14662926›Full record

ArticleJournal of clinical microbiology2003

Evaluation of a PCR assay for quantitation of Rickettsia rickettsii and closely related spotted fever group rickettsiae.

Marina E Eremeeva, Gregory A Dasch, David J Silverman

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Spotted fever diagnosis using molecular methods.Revista da Sociedade Brasileira de Medicina Tropical · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Replication Kinetics ofMicroorganisms · 2021
    Article
  12. A Novel TaqMan Assay for Detection ofJournal of clinical microbiology · 2019
    Article
  13. Diagnosis of spotted fever groupEpidemiology and infection · 2019
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Marina E EremeevaSchool of Medicine, University of Maryland-Baltimore, Baltimore, Maryland 21201-1559, USA. mge6@cdc.gov
Gregory A Dasch
David J Silverman
University of Maryland, Baltimore · USCenters for Disease Control and Prevention · US

Funding

RICKETTSIA RICKETTSII IN HUMAN ENDOTHELIAL CELLSR01AI017416 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI SILVERMAN, DAVID J · 1986 to 2002
$1.0M
NIAID NIH HHS AI-17416
6 · The paper itself

Abstract

A spotted fever rickettsia quantitative PCR assay (SQ-PCR) was developed for the detection and enumeration of Rickettsia rickettsii and other closely related spotted fever group rickettsiae. The assay is based on fluorescence detection of SYBR Green dye intercalation in a 154-bp fragment of the rOmpA gene during amplification by PCR. As few as 5 copies of the rOmpA gene of R. rickettsii can be detected. SQ-PCR is suitable for quantitation of R. rickettsii and 10 other genotypes of spotted fever group rickettsiae but not for R. akari, R. australis, R. bellii, or typhus group rickettsiae. The sensitivity of SQ-PCR was comparable to that of a plaque assay using centrifugation for inoculation. The SQ-PCR assay was applied successfully to the characterization of rickettsial stock cultures, the replication of rickettsiae in cell culture, the recovery of rickettsial DNA following different methods of extraction, and the quantitation of rickettsial loads in infected animal tissues, clinical samples, and ticks.

Indexed as

AnimalsBase SequenceCalibrationChlorocebus aethiopsDNA PrimersHumansPlasmidsPolymerase Chain ReactionRickettsia rickettsiiRocky Mountain Spotted FeverTemplates, GeneticTicksVero CellsDNA Primers

Identifiers

PMID14662926
PMCPMC308968
OpenAlexW2128010464

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.