Evidence map›Paper›PMID 14660359›Full record

ArticleApplied and environmental microbiology2003

Real-time PCR analysis of Vibrio vulnificus from oysters.

Mark S Campbell, Anita C Wright

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 168 citations in OpenAlex.

  1. Effects of aquaculture practices onApplied and environmental microbiology · 2026
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  9. Variable Freshwater Influences on the Abundance ofApplied and environmental microbiology · 2022
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  11. PathogenicmSystems · 2021
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  12. Rapid and Sensitive Detection ofFrontiers in microbiology · 2021
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  13. Review
  14. Detection ofFrontiers in microbiology · 2021
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  15. blaEnvironmental science and pollution research international · 2018
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  16. Article
  17. Article
  18. Development of a rapid PCR protocol to detectJournal of food science and technology · 2018
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  19. Diversity ofFrontiers in microbiology · 2017
    Article
  20. Climate influence on Vibrio and associated human diseases during the past half-century in the coastal North Atlantic.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Mark S CampbellUniversity of Florida, Gainesville, Florida 32611, USA.
Anita C Wright
University of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio vulnificus is an opportunistic human pathogen commonly found in estuarine environments. Infections are associated with raw oyster consumption and can produce rapidly fatal septicemia in susceptible individuals. Standard enumeration of this organism in shellfish or seawater is laborious and inaccurate; therefore, more efficient assays are needed. An oligonucleotide probe derived from the cytolysin gene, vvhA, was previously used for colony hybridizations to enumerate V. vulnificus. However, this method requires overnight growth, and vibrios may lack culturability under certain conditions. In the present study, we targeted the same locus for development of a TaqMan real-time PCR assay. Probe specificity was confirmed by amplification of 28 V. vulnificus templates and by the lack of a PCR product with 22 non-V. vulnificus strains. Detection of V. vulnificus in pure cultures was observed over a 6-log-unit linear range of concentration (10(2) to 10(8) CFU ml(-1)), with a lower limit of 72 fg of genomic DNA micro l of PCR mixture(-1) or the equivalent of six cells. Similar sensitivity was observed in DNA extracted from mixtures of V. vulnificus and V. parahaemolyticus cells. Real-time PCR enumeration of artificially inoculated oyster homogenates correlated well with colony hybridization counts (r(2) = 0.97). Numbers of indigenous V. vulnificus cells in oysters by real-time PCR showed no significant differences from numbers from plate counts with probe (t test; P = 0.43). Viable but nonculturable cells were also enumerated by real-time PCR and confirmed by the BacLight viability assay. These data indicate that real-time PCR can provide sensitive species-specific detection and enumeration of V. vulnificus in seafood.

Indexed as

AnimalsBacterial ProteinsColony Count, MicrobialDNA ProbesHemolysin ProteinsHumansOligonucleotide ProbesOstreidaePolymerase Chain ReactionSensitivity and SpecificitySpecies SpecificityTaq PolymeraseVibrio vulnificusBacterial ProteinsDNA ProbesHemolysin ProteinsOligonucleotide ProbesTaq PolymeraseVvhA protein, Vibrio vulnificus

Identifiers

PMID14660359
PMCPMC309878
OpenAlexW2140446523

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.