Evidence map›Paper›PMID 14652691›Full record

ReviewCurrent genetics2004

A genome's-eye view of the light-harvesting polypeptides of Chlamydomonas reinhardtii.

D Elrad, A R Grossman

Abstract readReview
PubMed Publisher
In one paragraph

Review in Current genetics, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 146 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. LHC-like Proteins: The Guardians of Photosynthesis.International journal of molecular sciences · 2023
    Review
  5. Identification and expression analysis of chlorophyll a/b binding protein gene family in grape (Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Regulation of Light Harvesting inPlant physiology · 2020
    Article
  10. Article
  11. Article
  12. Structure of a CProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

D ElradThe Department of Plant Biology, The Carnegie Institution of Washington, 260 Panama Street, Stanford, CA 94305, USA.
A R Grossman
Carnegie Institution for Science · USDepartment of Plant Biology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chlamydomonas reinhardtii is a valuable model system for defining the structure and function of polypeptides of the photosynthetic apparatus and the dynamic aspects of photosynthesis. Recently, a genome-wide analysis of cDNAs and a draft genome sequence that covers approximately 90% of the genome were made available, providing a clear picture of the composition of specific gene families, the relationships among the gene family members, and the location of each member on the genome. We used the available sequence information to analyze the extensive family of light-harvesting genes in C. reinhardtii. There are nine genes encoding polypeptides of the major light-harvesting complex of photosystem II, two genes encoding the minor light-harvesting polypeptides of photosystem II, and nine genes encoding polypeptides predicted to comprise the photosystem I light-harvesting complex. Furthermore, there are five genes encoding early light-induced proteins and two genes encoding LI818 polypeptides. A candidate for the PsbS gene has also been found in the raw genome sequence data (Niyogi, personal communication), although no genes encoding homologues of the Sep, or Hli polypeptides have been identified. In this manuscript, we identify and classify the family of light-harvesting polypeptides encoded on the C. reinhardtii genome. This is an important first step in designing specific genetic, biochemical, and physiological studies aimed at characterizing the composition, function, and regulation of the light-harvesting complexes.

Indexed as

Algal ProteinsAmino Acid SequenceAnimalsChlamydomonas reinhardtiiGene ExpressionGenome, ProtozoanLight-Harvesting Protein ComplexesMolecular Sequence DataMultigene FamilyPhotosystem II Protein ComplexPhotosystem I Protein ComplexPhylogenyProtozoan ProteinsSequence Homology, Amino AcidAlgal ProteinsLight-Harvesting Protein ComplexesPhotosystem II Protein ComplexPhotosystem I Protein ComplexProtozoan Proteins

Identifiers

PMID14652691
OpenAlexW1973607340

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.