Evidence map›Paper›PMID 14651474›Full record

ArticleThe Biochemical journal2004

Redox regulation of DNA binding activity of DREF (DNA replication-related element binding factor) in Drosophila.

Tae-Yeong Choi, So Young Park, Ho-Sung Kang, Jae-Hun Cheong, Han-Do Kim, Bok Luel Lee, Fumiko Hirose, Masamitsu Yamaguchi, Mi-Ae Yoo

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Tae-Yeong ChoiDepartment of Molecular Biology, College of Natural Science, Pusan National University, Busan 609-735, Korea.
So Young Park
Ho-Sung Kang
Jae-Hun Cheong
Han-Do Kim
Bok Luel Lee
Fumiko Hirose
Masamitsu Yamaguchi
Mi-Ae Yoo
Pusan National University · KRHimeji University · JPKyoto Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DREF [DRE (DNA replication-related element) binding factor] is an 80 kDa polypeptide homodimer which plays an important role in regulating cell proliferation-related genes. Both DNA binding and dimer formation activities are associated with residues 16-115 of the N-terminal region. However, the mechanisms by which DREF dimerization and DNA binding are regulated remain unknown. Here, we report that the DNA binding activity of DREF is regulated by a redox mechanism, and that the cysteine residues are involved in this regulation. Electrophoretic mobility shift analysis using Drosophila Kc cell extracts or recombinant DREF proteins indicated that the DNA binding domain is sufficient for redox regulation. Site-directed mutagenesis and transient transfection assays showed that Cys59 and/or Cys62 are critical both for DNA binding and for redox regulation, whereas Cys91 is dispensable. In addition, experiments using Kc cells indicated that the DNA binding activity and function of DREF are affected by the intracellular redox state. These findings give insight into the exact nature of DREF function in the regulation of target genes by the intracellular redox state.

Indexed as

Alkylating AgentsAnimalsBase SequenceCell LineCysteineDNADNA-Binding ProteinsDrosophilaDrosophila ProteinsMolecular Sequence DataOxidantsOxidation-ReductionProtein Structure, TertiarySulfhydryl CompoundsTranscription FactorsAlkylating AgentsCysteineDNADNA-Binding ProteinsDref protein, DrosophilaDrosophila ProteinsOxidantsSulfhydryl CompoundsTranscription Factors

Identifiers

PMID14651474
PMCPMC1224010
OpenAlexW1981931888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.