Evidence map›Paper›PMID 14647199›Full record

ArticleGenes and immunity2003

Analysis of the CTLA-4, CD28, and inducible costimulator (ICOS) genes in autoimmune thyroid disease.

Y Ban, T F Davies, D A Greenberg, A Kissin, B Marder, B Murphy, E S Concepcion, R B Villanueva, G Barbesino, V Ling and 1 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Genes and immunity, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 2 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 2 syntheses or guidelines pooled it, 87 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. The genetics of Graves' disease.Reviews in endocrine & metabolic disorders · 2024
    Review
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  15. Association of theBiomedical reports · 2015
    Article
  16. The Essential Role of Circulating Thyroglobulin in Maintaining Dominance of Natural Regulatory T Cell Function to Prevent Autoimmune Thyroiditis.Hormone and metabolic research = Hormon- und Stoffwechselforschung = Hormones et metabolisme · 2015
    Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Y BanDivision of Endocrinology, Diabetes, and Bone Diseases, Mount Sinai School of Medicine Box 1055, New York, NY 10029, USA. Yoshiyuki_Ban@mssm.edu
T F Davies
D A Greenberg
A Kissin
B Marder
B Murphy
E S Concepcion
R B Villanueva
G Barbesino
V Ling
Y Tomer
Icahn School of Medicine at Mount Sinai · USColumbia University · USInflammation Research Foundation · US

Funding

RESOLVING HETEROGENEITY IN EPILEPSY WITH GENETIC MARKERSR01NS027941 · NINDS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI GREENBERG, DAVID A. · 1990 to 2010
$9.0M
SUSCEPTIBILITY GENES IN AUTOIMMUNE THYROID DISEASER01DK052464 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI DAVIES, TERRY FRANCIS · 1997 to 2013
$3.0M
PSYCHIATRIC GENETICS AND FAMILY STUDIES--ROBUST METHODSR01MH048858 · NIMH · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HODGE, SUSAN E. · 1992 to 2010
$1.5M
TWO-LOCUS MODELS--HETEROGENEITY AND DIABETESR01DK031775 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GREENBERG, DAVID A. · 1987 to 2006
$1.1M
INTACT AND SCID MOUSE MODELS FOR GRAVES'DISEASER01DK045011 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI DAVIES, TERRY FRANCIS · 1993 to 2002
$854k
MAPPING GENES LINKED TO AUTOIMMUNE THYROID DISEASESR03DK058072 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI TOMER, YARON · 2000 to 2001
$170k
THYROID ANTIGEN SPECIFIC T CELLSR01DK035764 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI DAVIES, TERRY FRANCIS · 1986 to 1998
–
NIDDK NIH HHS DK02498NIDDK NIH HHS DK31775NIDDK NIH HHS DK35764NIDDK NIH HHS DK45011NIDDK NIH HHS DK52464NIDDK NIH HHS DK58072NIMH NIH HHS MH48858NINDS NIH HHS NS27941
6 · The paper itself

Abstract

The cytotoxic T lymphocyte-associated antigen-4 (CTLA-4) gene on 2q33 is associated with autoimmune thyroid diseases (AITDs). Our earlier study in 56 families showed linkage of 2q33 to the presence of thyroid antibodies (TAbs). The goals of this study were to confirm the linkage of the 2q33 region to TAbs, to fine map this region, and study the ICOS gene. We performed a linkage study in an expanded data set of 99 multiplex AITD-TAb families (529 individuals). The highest two-point LOD score of 2.9 was obtained for marker D2S325 on 2q33. To fine map this locus, we genotyped 238 Caucasian AITD patients and 137 controls for five additional markers in the linked locus, which contained the CTLA-4, CD28, and ICOS genes. The A/G single-nucleotide polymorphism at position 49 of CTLA-4 was associated with AITD (P=0.01, OR=1.5), while markers inside CD28 and ICOS were not. Functional studies have shown that the G allele was associated with reduced inhibition of T-cell proliferation by CTLA-4. We concluded that: (1) the AITD gene in the 2q33 locus is the CTLA-4 gene and not the CD28 or ICOS genes; and (2) the G allele is associated with decreased function of CTLA-4.

Indexed as

AllelesAntigens, CDAntigens, DifferentiationAntigens, Differentiation, T-LymphocyteCD28 AntigensChromosome MappingChromosomes, Human, Pair 2CTLA-4 AntigenFemaleGenotypeHumansInducible T-Cell Co-Stimulator ProteinLikelihood FunctionsLod ScoreMaleMicrosatellite RepeatsAntigens, CDAntigens, DifferentiationAntigens, Differentiation, T-LymphocyteCD28 AntigensCTLA-4 AntigenCTLA4 protein, humanICOS protein, humanInducible T-Cell Co-Stimulator Protein

Identifiers

PMID14647199
OpenAlexW2094579035

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.