Evidence map›Paper›PMID 14645274›Full record

ArticleJournal of bacteriology2003

FarR regulates the farAB-encoded efflux pump of Neisseria gonorrhoeae via an MtrR regulatory mechanism.

E-H Lee, C Rouquette-Loughlin, J P Folster, W M Shafer

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Antimicrobial agents and chemotherapy · 2021
    Article
  10. Article
  11. MarR family proteins are important regulators of clinically relevant antibiotic resistance.Protein science : a publication of the Protein Society · 2020
    Review
  12. Article
  13. Structural, Biochemical, andJournal of bacteriology · 2019
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

E-H LeeDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
C Rouquette-Loughlin
J P Folster
W M Shafer
Emory University · USVeterans Health Administration · US

Funding

GONOCOCCI: GENETICS OF RESISTANCE TO PMN PROTEINSR01AI021150 · NIAID · EMORY UNIVERSITY · PI SHAFER, WILLIAM MAURICE · 1985 to 2025
$5.5M
Gonococci: Genetics of Resistance to PMN ProteinsR37AI021150 · NIAID · EMORY UNIVERSITY · PI SHAFER, WILLIAM MAURICE · 2010 to 2019
$3.9M
MOLECULAR MECHANISMS OF MICROBIAL PATHOGENESIST32AI007470 · NIAID · EMORY UNIVERSITY · PI SPECK, SAMUEL H · 1995 to 2010
$3.2M
TOPICAL PROTEGRINS TO PREVENT STDS &HIV INFECTIONP01AI037945 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LEHRER, ROBERT IRVING · 1995 to 2003
$3.1M
MICROCHEMICAL ANALYSIS FACILITY FOR MOLECULAR BIOLOGYS10RR002878 · NCRR · EMORY UNIVERSITY · PI WALLACE, DOUGLAS C · 1986 to 1986
–
PROTEIN SEQUENCING HARDWARES10RR012878 · NCRR · EMORY UNIVERSITY · PI JENSEN, PETER E. · 1997 to 1997
–
MASS SPECTROMETER--TRIPLE QUADRUPOLES10RR013948 · NCRR · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1999 to 1999
–
MICROBIAL PATHOGEN GENOME PROJECT--NEISSERIA GONORRHOEAER01AI038399 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI DYER, DAVID W. · 1995 to 1998
–
NCRR NIH HHS RR02878NCRR NIH HHS RR12878NCRR NIH HHS RR13948NIAID NIH HHS 5T32 AI-07470NIAID NIH HHS AI-21150-17NIAID NIH HHS AI-37945NIAID NIH HHS AI-38399NIAID NIH HHS P01 AI037945NIAID NIH HHS R01 AI021150NIAID NIH HHS R37 AI021150NIAID NIH HHS T32 AI007470
6 · The paper itself

Abstract

The farAB operon of Neisseria gonorrhoeae encodes an efflux pump which mediates gonococcal resistance to antibacterial fatty acids. It was previously observed that expression of the farAB operon was positively regulated by MtrR, which is a repressor of the mtrCDE-encoded efflux pump system (E.-H. Lee and W. M. Shafer, Mol. Microbiol. 33:839-845, 1999). This regulation was believed to be indirect since MtrR did not bind to the farAB promoter. In this study, computer analysis of the gonococcal genome sequence database, lacZ reporter fusions, and gel mobility shift assays were used to elucidate the regulatory mechanism by which expression of the farAB operon is modulated by MtrR in gonococci. We identified a regulatory protein belonging to the MarR family of transcriptional repressors and found that it negatively controls expression of farAB by directly binding to the farAB promoter. We designated this regulator FarR to signify its role in regulating the farAB operon. We found that MtrR binds to the farR promoter, thereby repressing farR expression. Hence, MtrR regulates farAB in a positive fashion by modulating farR expression. This MtrR regulatory cascade seems to play an important role in adjusting levels of the FarAB and MtrCDE efflux pumps to prevent their excess expression in gonococci.

Indexed as

Bacterial ProteinsFerredoxin-NADP ReductaseAmino Acid Transport Systems, NeutralDNA-Binding ProteinsEscherichia coli ProteinsGene Expression Regulation, BacterialLac OperonNeisseria gonorrhoeaePromoter Regions, GeneticRepressor ProteinsTranscription FactorsAmino Acid Transport Systems, NeutralBacterial ProteinsDNA-Binding ProteinsEscherichia coli ProteinsFerredoxin-NADP Reductasemethionine synthase reductasemngR protein, E colimtrR protein, Neisseria gonorrhoeaeRepressor ProteinsTranscription Factors

Identifiers

PMID14645274
PMCPMC296254
OpenAlexW2109489214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.