Evidence map›Paper›PMID 14645098›Full record

ArticleBiophysical journal2003

Detecting and quantifying colocalization of cell surface molecules by single particle fluorescence imaging.

Ian E G Morrison, Ioannis Karakikes, Rosamund E Barber, Nelson Fernández, Richard J Cherry

Abstract read
In one paragraph

Article in Biophysical journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Motion analysis of live objects by super-resolution fluorescence microscopy.Computational and mathematical methods in medicine · 2012
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ian E G MorrisonDepartment of Biological Sciences, University of Essex, Colchester, CO4 3SQ, UK.
Ioannis Karakikes
Rosamund E Barber
Nelson Fernández
Richard J Cherry

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single particle fluorescence imaging (SPFI) uses the high sensitivity of fluorescence to visualize individual molecules that have been selectively labeled with small fluorescent particles. The positions of particles are determined by fitting the intensity profile of their images to a 2-D Gaussian function. We have exploited the positional information obtained from SPFI to develop a method for detecting colocalization of cell surface molecules. This involves labeling two different molecules with different colored fluorophores and determining their positions separately by dual wavelength imaging. The images are analyzed to quantify the overlap of the particle images and hence determine the extent of colocalization of the labeled molecules. Simulated images and experiments with a model system are used to investigate the extent to which colocalization occurs from chance proximity of randomly distributed molecules. A method of correcting for positional shifts that result from chromatic aberration is presented. The technique provides quantification of the extent of colocalization and can detect whether colocalized molecules occur singly or in clusters. We have obtained preliminary data for colocalization of molecules on intact cells. Cells often exhibit particulate autofluorescence that can interfere with the measurements; a method for overcoming this problem by triple wavelength imaging is described.

Indexed as

AnimalsCell MembraneCHO CellsChromosome AberrationsCricetinaeEscherichia coliFluorescent DyesImage Processing, Computer-AssistedLipopolysaccharide ReceptorsLipopolysaccharidesMicroscopy, ConfocalMicroscopy, FluorescenceNormal DistributionPolylysineTransfectionFluorescent DyesLipopolysaccharide ReceptorsLipopolysaccharidesPolylysine

Identifiers

PMID14645098
PMCPMC1303710

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.