Evidence map›Paper›PMID 14645064›Full record

ArticleBiophysical journal2003

Electrophysiological analysis of the yeast V-type proton pump: variable coupling ratio and proton shunt.

Carsten Kettner, Adam Bertl, Gerhard Obermeyer, Clifford Slayman, Hermann Bihler

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 62 citations in OpenAlex.

  1. Multiscale kinetic analysis of proteins.Current opinion in structural biology · 2022
    Review
  2. Modulation of the HFrontiers in molecular biosciences · 2022
    Review
  3. The Plant V-ATPase.Frontiers in plant science · 2022
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Regulation of Amino Acid Transport in Saccharomyces cerevisiae.Microbiology and molecular biology reviews : MMBR · 2019
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Vacuolar-type H+-ATPase-mediated proton transport in the rat parietal cell.Pflugers Archiv : European journal of physiology · 2012
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Carsten KettnerBotanisches Institut I, Universität Karlsruhe, Karlsruhe, Germany.
Adam Bertl
Gerhard Obermeyer
Clifford Slayman
Hermann Bihler
Karlsruhe Institute of Technology · DEUniversity of Salzburg · ATYale University · US

Funding

STRUCTURE AND FUNCTION OF K+ CARRIER-CHANNELS IN YEASTR01GM060696 · NIGMS · YALE UNIVERSITY · PI SLAYMAN, CLIFFORD L · 2000 to 2003
$936k
NIGMS NIH HHS GM-60696NIGMS NIH HHS R01 GM060696
6 · The paper itself

Abstract

Isolated vacuoles from the yeast Saccharomyces cerevisiae were examined in the whole-vacuole mode of patch recording, to get a detailed functional description of the vacuolar proton pump, the V-ATPase. Functioning of the V-ATPase was characterized by its current-voltage (I-V) relationship, obtained for various levels of vacuolar and cytosolic pH. I-V curves for the V-ATPase were computed as the difference between I-V curves obtained with the pump switched on (ATP, ADP, and Pi present) or off (no ATP). These difference current-voltage relationships usually crossed the voltage axis within the experimental range (from -80 to +80 mV), thus measuring the reversal voltage (ER) for the V-ATPase, which could be compared with the standing ion gradients and free energy of ATP hydrolysis, to calculate the apparent pump stoichiometry or coupling ratio: the number of protons transported for each ATP molecule hydrolyzed. This ratio was found to depend strongly upon the pH difference (DeltapH) across the vacuolar membrane, being approximately 2H+/ATP at high DeltapH (4 pH units) and increasing to >4H+/ATP for small or zero DeltapH. That result is in quantitative agreement with previous determinations on plant vacuoles. Considerations of purely electrical behavior, together with the physical properties of a recent detailed structural model for V-ATPases, led to a linear equivalent circuit--which quantitatively accounts for all observations of variable coupling ratios in fungal and plant V-ATPases by variations of the conductance for bona fide proton pumping (GP) through the ATPase relative to independent proton shunting (GS) through the same protein.

Indexed as

Adenosine TriphosphateBiophysical PhenomenaBiophysicsCytoplasmElectrophysiologyHydrogen-Ion ConcentrationHydrolysisIonsProton PumpsProtonsSaccharomyces cerevisiaeVacuolar Proton-Translocating ATPasesAdenosine TriphosphateIonsProton PumpsProtonsVacuolar Proton-Translocating ATPases

Identifiers

PMID14645064
PMCPMC1303676
OpenAlexW1998285219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.