Evidence map›Paper›PMID 14641110›Full record

ArticleThe Biochemical journal2004

Peroxisomal-proliferator-activated receptor alpha activates transcription of the rat hepatic malonyl-CoA decarboxylase gene: a key regulation of malonyl-CoA level.

Gha Young Lee, Nam Hee Kim, Zheng-Shan Zhao, Bong Soo Cha, Yu Sam Kim

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 97 citations in OpenAlex.

  1. Review
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  12. PPARα augments heart function and cardiac fatty acid oxidation in early experimental polymicrobial sepsis.American journal of physiology. Heart and circulatory physiology · 2017
    Article
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  14. Protective Effects ofBiomolecules & therapeutics · 2016
    Article
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  17. Mechanisms of intrahepatic triglyceride accumulation.World journal of gastroenterology · 2016
    Review
  18. Article
  19. Review
  20. Inhibition of Dexamethasone-induced Fatty Liver Development by Reducing miR-17-5p Levels.Molecular therapy : the journal of the American Society of Gene Therapy · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Gha Young LeeDepartment of Biochemistry, College of Science, Protein Network Research Center, Yonsei University, Seoul, South Korea.
Nam Hee Kim
Zheng-Shan Zhao
Bong Soo Cha
Yu Sam Kim
Yonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MCD (malonyl-CoA decarboxylase), which catalyses decarboxylation of malonyl-CoA, is known to play an important role in the regulation of malonyl-CoA concentration. Recently, it has been observed that the expression of MCD is significantly decreased in the hearts of the PPARalpha (peroxisome-proliferator-activated receptor alpha) (-/-) mice, where the rate of fatty-acid oxidation is decreased by the increased malonyl-CoA level [Campbell, Kozak, Wagner, Altarejos, Dyck, Belke, Severson, Kelly and Lopaschuk (2002) J. Biol. Chem. 277, 4098-4103]. This suggests that MCD may be transcriptionally regulated by PPARalpha. To investigate whether PPARalpha is truly responsible for transcriptional regulation of the rat MCD gene, transient reporter assay was performed in CV-1 cells. The promoter activity was increased by 17-fold in CV-1 cells co-transfected with PPARalpha/retinoid X receptor alpha expression plasmid. In sequence analysis of the promoter region, three putative PPREs (PPAR response elements) were identified, and promoter deletion analysis showed that PPRE2 and PPRE3 were functional. Electrophoretic mobility-shift assays revealed that PPARalpha/retinoid X receptor alpha heterodimer indeed bound to the two PPREs, and the binding specificity of PPARalpha on PPRE was also confirmed by experiments with mutated oligonucleotides. These results indicate that the elements behaved as a responsive site to PPARalpha activation. MCD mRNA levels in WY14643-treated rat hepatoma cells as well as in the liver of fenofibrate-fed Otsuka Long-Evans Tokushima fatty rats were also found to be increased, suggesting that PPARalpha can activate the rat hepatic MCD transcription by binding to the PPREs in the promoter. We propose that MCD performs an important role in understanding the regulatory mechanism between activated PPARalpha and fatty-acid oxidation by altering the malonyl-CoA concentration.

Indexed as

Transcriptional ActivationAnimalsBase SequenceBinding SitesCarboxy-LyasesCell LineCell Line, TumorFenofibrateGene Expression Regulation, EnzymologicLiverMalonyl Coenzyme AMolecular Sequence DataPromoter Regions, GeneticPyrimidinesRatsRats, Inbred OLETFCarboxy-LyasesFenofibratemalonyl-CoA decarboxylaseMalonyl Coenzyme Apirinixic acidPyrimidinesReceptors, Cytoplasmic and NuclearReceptors, Retinoic AcidRetinoid X ReceptorsRNA, MessengerTranscription FactorsTriglycerides

Identifiers

PMID14641110
PMCPMC1224007
OpenAlexW2031440577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.