Evidence map›Paper›PMID 14633985›Full record

ArticleThe EMBO journal2003

RNA-binding protein Csx1 mediates global control of gene expression in response to oxidative stress.

Miguel A Rodríguez-Gabriel, Gavin Burns, W Hayes McDonald, Victoria Martín, John R Yates, Jürg Bähler, Paul Russell

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
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  4. Two Novel Dimorphism-Related Virulence Factors ofInternational journal of molecular sciences · 2021
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  6. Review
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  13. Cadmium-induced proteome remodeling regulated by Spc1/Sty1 and Zip1 in fission yeast.Toxicological sciences : an official journal of the Society of Toxicology · 2012
    Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Miguel A Rodríguez-GabrielDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA. miguelr@scripps.edu
Gavin Burns
W Hayes McDonald
Victoria Martín
John R Yates
Jürg Bähler
Paul Russell
Scripps Research Institute · US

Funding

Yeast Genetics and Stress Response Genes-BiomedicalP42ES010337 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TUKEY, ROBERT H · 2000 to 2022
$69.8M
PROTEOME ANALYSIS OF NORMAL AND CATARACTOUS LENSESR01EY013288 · NEI · SCRIPPS RESEARCH INSTITUTE · PI YATES, JOHN ROBERT · 2000 to 2003
$1.4M
Cancer Research UK A6517NEI NIH HHS EY1328801NIEHS NIH HHS ES10337NIEHS NIH HHS P42 ES010337Wellcome Trust 077118
6 · The paper itself

Abstract

Fission yeast Spc1 (Sty1), a stress-activated mitogen-activated protein kinase (MAPK) homologous to human p38, orchestrates global changes in gene expression in response to diverse forms of cytotoxic stress. This control is partly mediated through Atf1, a transcription factor homologous to human ATF2. How Spc1 controls Atf1, and how the cells tailor gene expression patterns to different forms of stress, are unknown. Here we describe Csx1, a novel protein crucial for survival of oxidative but not osmotic stress. Csx1 associates with and stabilizes atf1+ mRNA in response to oxidative stress. Csx1 controls expression of the majority of the genes induced by oxidative stress, including most of the genes regulated by Spc1 and Atf1. These studies reveal a novel mechanism controlling MAPK-regulated transcription factors and suggest how gene expression patterns can be customized to specific forms of stress. Csx1-like proteins in humans may perform similar tasks.

Indexed as

Fungal ProteinsGene Expression RegulationHomeobox Protein Nkx-2.5Homeodomain ProteinsMutagenesis, InsertionalOligonucleotide Array Sequence AnalysisOxidative StressPhosphorylationRecombinant ProteinsRNA-Binding ProteinsRNA, MessengerSchizosaccharomycesTranscription FactorsFungal ProteinsHomeobox Protein Nkx-2.5Homeodomain ProteinsNKX2-5 protein, humanRecombinant ProteinsRNA-Binding ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID14633985
PMCPMC291838
OpenAlexW2009187458

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.