Evidence map›Paper›PMID 14633604›Full record

ArticleThe American journal of pathology2003

Gene expression profiling of alcoholic liver disease in the baboon (Papio hamadryas) and human liver.

Devanshi Seth, Maria A Leo, Peter H McGuinness, Charles S Lieber, Yvonne Brennan, Rohan Williams, Xin M Wang, Geoffrey W McCaughan, Mark D Gorrell, Paul S Haber

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Osteology of the Hamadryas Baboon (Animals : an open access journal from MDPI · 2023
    Article
  5. Review
  6. Article
  7. Annexin A2 in Fibrinolysis, Inflammation and Fibrosis.International journal of molecular sciences · 2021
    Review
  8. Review
  9. Article
  10. Trinitrotoluene Induces Endoplasmic Reticulum Stress and Apoptosis in HePG2 Cells.Medical science monitor : international medical journal of experimental and clinical research · 2015
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Chronic alcohol exposure alters gene expression in HepG2 cells.Alcoholism, clinical and experimental research · 2012
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Devanshi SethDrug Health Services, Royal Prince Alfred Hospital, Camperdown, New South Wales, Australia. phaber@mail.usyd.edu.au
Maria A Leo
Peter H McGuinness
Charles S Lieber
Yvonne Brennan
Rohan Williams
Xin M Wang
Geoffrey W McCaughan
Mark D Gorrell
Paul S Haber
Royal Prince Alfred Hospital · AUCentenary Institute · AUIcahn School of Medicine at Mount Sinai · USUnited States Department of Veterans Affairs · USUniversity of Sydney · AU

Funding

DLPC TREATMENT OF ALCOHOLIC AND NON ALCOHOLIC FIBROSISR01AA011115 · NIAAA · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI LIEBER, CHARLES S · 1996 to 2006
$1.7M
CHRONIC HEPATITIS C: MOLECULAR &CELLULAR MARKERSR01DK056402 · NIDDK · UNIVERSITY OF SYDNEY · PI FARRELL, GEOFFREY · 1999 to 2003
$528k
NIAAA NIH HHS AA11115NIAAA NIH HHS R01 AA011115NIDDK NIH HHS DK56402NIDDK NIH HHS R01 DK056402Wellcome Trust
6 · The paper itself

Abstract

The molecular pathogenesis of alcoholic liver disease (ALD) is not well understood. Gene expression profiling has the potential to identify new pathways and altered molecules in ALD. Gene expression profiles of ALD in a baboon model and humans were compared using DNA arrays. Reverse transcriptase-polymerase chain reaction and immunohistochemistry were used for downstream analysis of array results. cDNA array analysis revealed differential expression of several novel genes and pathways in addition to genes known to be involved in ALD pathogenesis. Overall gene expression profiles were similar in both species, with a majority of genes involved with fibrogenesis and xenobiotic metabolism, as well as inflammation, oxidant stress, and cell signaling. Genes associated with stellate cell activation (collagens, matrix metalloproteinases, tissue inhibitors of matrix metalloproteinase) were up-regulated in humans. Decreased expression of several metallothioneins was unexpected. Fourteen molecules related to the annexin family were up-regulated, including annexin A1 and A2. Immunofluorescence revealed a marked overexpression of annexin A2 in proliferating bile duct cells, hepatocyte cell surface, and selective co-localization with CD14-positive cells in human ALD. The gene expression profile of ALD is dominated by alcohol metabolism and inflammation and differs from other liver diseases. Annexins may play a role in the progression of fibrosis in ALD.

Indexed as

AdultAnimalsCase-Control StudiesGene Expression ProfilingHumansLiver Diseases, AlcoholicMaleMiddle AgedOligonucleotide Array Sequence AnalysisPapio

Identifiers

PMID14633604
PMCPMC1892389
OpenAlexW2077927355

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.