Evidence map›Paper›PMID 14630954›Full record

ArticlePlant physiology2003

Auxin responsiveness of a novel cytochrome p450 in rice coleoptiles.

Christina Chaban, Frank Waller, Masaki Furuya, Peter Nick

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  8. Genome-Wide Identification of theFrontiers in genetics · 2021
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  13. Cloning and expression ofActa pharmaceutica Sinica. B · 2016
    Article
  14. Article
  15. Article
  16. Article
  17. Cytochromes p450.The arabidopsis book · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Christina ChabanInstitut für Biologie II, Schänzlestrasse 1, D-79104 Freiburg, Germany. christian.chaban@uni-freiburg.de
Frank Waller
Masaki Furuya
Peter Nick
Hitachi (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An early auxin-induced gene was isolated from rice (Oryza sativa L. subsp. japonica cv Nihonmasari) coleoptiles by a fluorescent-labeled differential display screen. The full-length gene contains conserved domains characteristic for the cytochrome p450 superfamily. This gene, designated as CYP87A3, was weakly expressed in dark-grown coleoptiles but was up-regulated rapidly and transiently when coleoptile segments were incubated in 5 microm indole-3-acetic acid. This induction by auxin could not be suppressed by cycloheximide. Depletion of segments from endogenous auxin reduced the amount of CYP87A3 transcripts. The CYP87A3 transcript level was rapidly, although transiently, up-regulated in response to light as well. The observed pattern of gene regulation might indicate a role in the suppression of auxin-induced coleoptile growth. The role of CYP87A3 is discussed with respect to auxin signaling in the regulation of coleoptile growth.

Indexed as

Amino Acid SequenceBinding SitesCloning, MolecularCotyledonCytochrome P-450 Enzyme SystemGene Expression Regulation, EnzymologicGene Expression Regulation, PlantIndoleacetic AcidsMolecular Sequence DataOryzaOxygenRecombinant Fusion ProteinsRNA, PlantSequence AlignmentSequence Homology, Amino AcidCytochrome P-450 Enzyme SystemIndoleacetic AcidsOxygenRecombinant Fusion ProteinsRNA, Plant

Identifiers

PMID14630954
PMCPMC300751
OpenAlexW2139777701

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.