Evidence map›Paper›PMID 14624253›Full record

ArticlePLoS biology2003

T cell receptor-independent basal signaling via Erk and Abl kinases suppresses RAG gene expression.

Jeroen P Roose, Maximilian Diehn, Michael G Tomlinson, Joseph Lin, Ash A Alizadeh, David Botstein, Patrick O Brown, Arthur Weiss

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 99 citations in OpenAlex.

  1. Presetting CAR-T cells during ex vivo biomanufacturing.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
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  13. Tonic Signals: Why Do Lymphocytes Bother?Trends in immunology · 2017
    Review
  14. Article
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  18. Review
  19. Receptor revision in CD4 T cells is influenced by follicular helper T cell formation and germinal-center interactions.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jeroen P RooseDepartment of Medicine, University of California, San Francisco, USA.
Maximilian Diehn
Michael G Tomlinson
Joseph Lin
Ash A Alizadeh
David Botstein
Patrick O Brown
Arthur Weiss
University of California, San Francisco · USStanford University · USHoward Hughes Medical Institute · US

Funding

FUNCTION OF THE VAV PROTOONCOGENER01CA072531 · NCI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI WEISS, ARTHUR · 1997 to 2004
$1.2M
NCI NIH HHS CA 72531NCI NIH HHS R01 CA072531
6 · The paper itself

Abstract

Signal transduction pathways guided by cellular receptors commonly exhibit low-level constitutive signaling in a continuous, ligand-independent manner. The dynamic equilibrium of positive and negative regulators establishes such a tonic signal. Ligand-independent signaling by the precursors of mature antigen receptors regulates development of B and T lymphocytes. Here we describe a basal signal that controls gene expression profiles in the Jurkat T cell line and mouse thymocytes. Using DNA microarrays and Northern blots to analyze unstimulated cells, we demonstrate that expression of a cluster of genes, including RAG-1 and RAG-2, is repressed by constitutive signals requiring the adapter molecules LAT and SLP-76. This TCR-like pathway results in constitutive low-level activity of Erk and Abl kinases. Inhibition of Abl by the drug STI-571 or inhibition of signaling events upstream of Erk increases RAG-1 expression. Our data suggest that physiologic gene expression programs depend upon tonic activity of signaling pathways independent of receptor ligation.

Indexed as

Gene Expression RegulationAdaptor Proteins, Signal TransducingAnimalsBenzamidesBlotting, NorthernBlotting, WesternB-LymphocytesCell SeparationDNA-Binding ProteinsDNA, ComplementaryEnzyme ActivationExtracellular Signal-Regulated MAP KinasesFlow CytometryHomeodomain ProteinsHumansImatinib MesylateAdaptor Proteins, Signal TransducingBenzamidesDNA-Binding ProteinsDNA, ComplementaryExtracellular Signal-Regulated MAP KinasesHomeodomain ProteinsImatinib MesylateLigandsPhosphoproteinsPiperazinesProtein Kinase CProto-Oncogene Proteins c-ablPyrimidinesRAG-1 proteinReceptors, Antigen, T-CellRNASLP-76 signal Transducing adaptor proteinsTyrosineV(D)J recombination activating protein 2

Identifiers

PMID14624253
PMCPMC261890
OpenAlexW2169366197

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.