Evidence map›Paper›PMID 14618239›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2004

Genomic characterization of the S-adenosylmethionine decarboxylase genes from soybean.

Ai-Guo Tian, Jing-Yun Zhao, Jin-Song Zhang, Jun-Yi Gai, Shou-Yi Chen

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Molecular cloning and characterization ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2017
    Article
  6. Article
  7. Article
  8. Article
  9. Cloning and comparative analysis of the gene encoding diacylglycerol acyltransferase from wild type and cultivated soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Ai-Guo TianPlant Biotechnology Laboratory, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, 100101, Beijing, China.
Jing-Yun Zhao
Jin-Song Zhang
Jun-Yi Gai
Shou-Yi Chen
Institute of Genetics and Developmental Biology · CNChinese Academy of Sciences · CNNanjing Agricultural University · CNShanxi Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A full-length gene GmSAMDC1, encoding the S-adenosylmethionine decarboxylase (SAMDC), a key enzyme involved in polyamine biosynthesis, was identified from soybean expressed sequence tags and was characterized. GmSAMDC1 encoded a peptide of 355 amino acids. When compared with other plant SAMDCs, the GmSAMDC1 protein had several highly conserved regions including a putative pro-enzyme cleavage site and a PEST sequence. The 5' leader sequence of the the GmSAMDC1 mRNA contained two additional open reading frames (ORFs), which may regulate the translational process. The genomic sequence of the GmSAMDC1 gene contained three introns in the 5' leader sequence, but no intron in the 3'-UTR or the main pro-enzyme ORF. A simple sequence repeat (SSR) was found in intron 2, and the GmSAMDC1 gene was mapped to linkage group D1 using this SSR. The genomic organization of the GmSAMDC1 gene in the subgenus Glycine and the subgenus Soja was found to be different by Southern-blot and PCR analysis. A pseudogene, GmSAMDC2, was also identified. This gene contained no intron and lost its two uORFs. Northern-blot analysis showed that the GmSAMDC1 gene expression was induced by salt, drought and cold, but not induced by wounding; suggesting that the gene was implicated in response to multiple-stress conditions.

Indexed as

Genome, Plant3' Untranslated RegionsAdenosylmethionine DecarboxylaseAmino Acid SequenceBase SequenceBlotting, NorthernBlotting, SouthernDNA, ComplementaryDNA PrimersGenes, PlantGlycine maxIntronsMolecular Sequence DataOpen Reading FramesPolymerase Chain ReactionPseudogenes3' Untranslated RegionsAdenosylmethionine DecarboxylaseDNA, ComplementaryDNA PrimersRNA, Messenger

Identifiers

PMID14618239
OpenAlexW2092064088

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.