Evidence map›Paper›PMID 14614563›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2004

Delimitation of the chromosomal region for a quantitative trait locus, qUVR- 10, conferring resistance to ultraviolet-B radiation in rice (Oryza sativa L.).

T Ueda, T Sato, H Numa, M Yano

Abstract readComparative Study
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

T UedaNational Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba, 305-8602, Ibaraki, Japan. uechu@nias.affrc.go.jp
T Sato
H Numa
M Yano

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wide variation in ultraviolet-B (UVB) resistance is observed among rice varieties. In a previous study, three quantitative trait loci (QTLs) controlling UVB resistance were detected by QTL analysis, using backcross inbred lines (BILs) derived from a cross between a japonica cultivar, 'Nipponbare', and an indica cultivar, 'Kasalath'. Among them, qUVR- 10, a QTL for UVB resistance on chromosome 10, showed the largest effect. Plants homozygous for the Nipponbare allele at qUVR- 10 were resistant to UVB, unlike those homozygous for the Kasalath allele. To determine more precisely the chromosomal location of qUVR- 10, we performed a linkage mapping of qUVR- 10 as a single Mendelian factor using advanced backcross progeny. Advanced progeny testing of F(4) families enabled us to determine the genotype classes of the qUVR- 10 locus with high reliability. As a result, qUVR- 10 was mapped between RFLP markers C60755S and C1757S, and co-segregated with C913A. In addition, a sequence showing high similarity to the Arabidopsis cyclobutane pyrimidine dimer (CPD) photolyase gene, which has been found to be involved in sensitivity to UV radiation in Arabidopsis and rice, was mapped in the candidate genomic region of qUVR- 10. This result suggests that the CPD photolyase gene is a positional candidate for qUVR- 10.

Indexed as

Chromosome MappingUltraviolet RaysCrosses, GeneticDNA PrimersGenetic MarkersOryzaPolymorphism, Restriction Fragment LengthPyrimidine DimersQuantitative Trait LociDNA PrimersGenetic MarkersPyrimidine Dimers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.