ArticleProceedings of the National Academy of Sciences of the United States of America2003
Quantitative evolutionary design of glucose 6-phosphate dehydrogenase expression in human erythrocytes.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
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- Design Principle for Decoding Calcium Signals to Generate Specific Gene Expression Via Transcription.Plant physiology · 2020Article
- Disulfide reductase systems in liver.British journal of pharmacology · 2019Review
- Mapping the phenotypic repertoire of the cytoplasmic 2-Cys peroxiredoxin - Thioredoxin system. 1. Understanding commonalities and differences among cell types.Redox biology · 2018Article
- Organ reserve, excess metabolic capacity, and aging.Biogerontology · 2018Review
- Article
- Identification and Function Analysis of enolase Gene NlEno1 from Nilaparvata lugens (Stål) (Hemiptera:Delphacidae).Journal of insect science (Online) · 2015Article
- Genetic variants that confer resistance to malaria are associated with red blood cell traits in African-Americans: an electronic medical record-based genome-wide association study.G3 (Bethesda, Md.) · 2013Article
- An Assay for the Rate of Removal of Extracellular Hydrogen Peroxide by Cells.Redox biology · 2013Article
- Relating mutant genotype to phenotype via quantitative behavior of the NADPH redox cycle in human erythrocytes.PloS one · 2010Article
- Glutathione synthesis and turnover in the human erythrocyte: alignment of a model based on detailed enzyme kinetics with experimental data.The Journal of biological chemistry · 2010Article
- Identifying quantitative operation principles in metabolic pathways: a systematic method for searching feasible enzyme activity patterns leading to cellular adaptive responses.BMC bioinformatics · 2009Article
- Quantifying global tolerance of biochemical systems: design implications for moiety-transfer cycles.PLoS computational biology · 2009Article
- Flux control and excess capacity in the enzymes of glycolysis and their relationship to flight metabolism in Drosophila melanogaster.Proceedings of the National Academy of Sciences of the United States of America · 2006Article
- Use of physiological constraints to identify quantitative design principles for gene expression in yeast adaptation to heat shock.BMC bioinformatics · 2006Article
- Evolution of enzymes in a series is driven by dissimilar functional demands.Proceedings of the National Academy of Sciences of the United States of America · 2006Article
- Evolution of dominance in metabolic pathways.Genetics · 2004Article
- Uniform sampling of steady-state flux spaces: means to design experiments and to interpret enzymopathies.Biophysical journal · 2004Article
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2 authors.
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Abstract
Why do the activities of some enzymes greatly exceed the flux capacity of the embedding pathways? This is a puzzling open problem in quantitative evolutionary design. In this work we investigate reasons for high expression of a thoroughly characterized enzyme: glucose 6-phosphate dehydrogenase (G6PD) in human erythrocytes. G6PD catalyses the first step of the pathway that supplies NADPH for antioxidant defense mechanisms. Normal G6PD activity far exceeds the capacity of human erythrocytes for a steady NADPH supply, which is limited upstream of G6PD. However, the distribution of erythrocyte G6PD activity in human populations reveals a selective pressure for maintaining high activity. To clarify the nature of this selective pressure, we studied how G6PD activity and other parameters in a model of the NADPH redox cycle affect metabolic performance. Our analysis indicates that normal G6PD activity is sufficient but not superfluous to avoid NADPH depletion and ensure timely adaptation of the NADPH supply during pulses of oxidative load such as those that occur during adherence of erythrocytes to phagocytes. These results suggest that large excess capacities found in some biochemical and physiological systems, rather than representing large safety factors, may reflect a close match of system design to unscrutinized performance requirements. Understanding quantitative evolutionary design thus calls for careful consideration of the various performance specifications that biological components/processes must meet in order for the organism to be fit. The biochemical systems framework used in this paper is generally applicable for such a detailed examination of the quantitative evolutionary design of gene expression levels in other systems.
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