Evidence map›Paper›PMID 14610193›Full record

ArticleJournal of virology2003

Deletions in the transmembrane domain of a sindbis virus glycoprotein alter virus infectivity, stability, and host range.

Raquel Hernandez, Christine Sinodis, Michelle Horton, Davis Ferreira, Chunning Yang, Dennis T Brown

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 49 citations in OpenAlex.

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  10. Eilat virus, a unique alphavirus with host range restricted to insects by RNA replication.Proceedings of the National Academy of Sciences of the United States of America · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Raquel HernandezDepartment of Molecular and Structural Biochemistry, North Carolina State University, Raleigh, North Carolina 27695, USA.
Christine Sinodis
Michelle Horton
Davis Ferreira
Chunning Yang
Dennis T Brown
North Carolina State University · US

Funding

STRUCTURE AND ASSEMBLY OF AN ALPHAVIRUSR01AI042775 · NIAID · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI BROWN, DENNIS T · 1999 to 2003
$817k
NIAID NIH HHS AI-42775NIAID NIH HHS R01 AI042775
6 · The paper itself

Abstract

The alphaviruses are composed of two icosahedral protein shells, one nested within the other. A membrane bilayer derived from the host cell is sandwiched between the protein shells. The protein shells are attached to one another by protein domains which extend one of the proteins of the outer shell through the membrane bilayer to attach to the inner shell. We have examined the interaction of the membrane-spanning domain of one of the membrane glycoproteins with the membrane bilayer and with other virus proteins in an attempt to understand the role this domain plays in virus assembly and function. Through incremental deletions, we have reduced the length of a virus membrane protein transmembrane domain from its normal 26 amino acids to 8 amino acids. We examined the effect of these deletions on the assembly and function of virus particles. We found that progressive truncations in the transmembrane domain profoundly affected production of infectious virus in a cyclic fashion. We also found that membrane composition effects protein-protein and protein-membrane interactions during virus assembly.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCell LineCricetinaeDNA PrimersLipid BilayersMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionSequence DeletionSequence Homology, Amino AcidSindbis VirusVirus AssemblyDNA PrimersLipid Bilayers

Identifiers

PMID14610193
PMCPMC262594
OpenAlexW2067827135

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.