Evidence map›Paper›PMID 14602914›Full record

ArticleNucleic acids research2003

Bidirectional replication from an internal ori site of the linear N15 plasmid prophage.

Nikolai V Ravin, Victor V Kuprianov, Eddie B Gilcrease, Sherwood R Casjens

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  4. CTP andeLife · 2021
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  13. The ABCs of plasmid replication and segregation.Nature reviews. Microbiology · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nikolai V RavinCentre Bioengineering, Russian Academy of Sciences, Prosp. 60-let Oktiabria, Building 7-1, Moscow, 117312, Russia. nravin@biengi.ac.ru
Victor V Kuprianov
Eddie B Gilcrease
Sherwood R Casjens
Russian Academy of Sciences · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The prophage of coliphage N15 is not integrated into the chromosome but exists as a linear plasmid molecule with covalently closed hairpin ends (telomeres). Upon infection the injected phage DNA circularizes via its cohesive ends. Then, a phage-encoded enzyme, protelomerase, cuts the circle and forms the hairpin telomeres. N15 protelomerase acts as a telomere-resolving enzyme during prophage DNA replication. We characterized the N15 replicon and found that replication of circular N15 miniplasmids requires only the repA gene, which encodes a multidomain protein homologous to replication proteins of bacterial plasmids replicated by a theta-mechanism. Replication of a linear N15 miniplasmid also requires the protelomerase gene and telomere regions. N15 prophage replication is initiated at an internal ori site located within repA and proceeds bidirectionally. Electron microscopy data suggest that after duplication of the left telomere, protelomerase cuts this site generating Y-shaped molecules. Full replication of the molecule and subsequent resolution of the right telomere then results in two linear plasmid molecules. N15 prophage replication thus appears to follow a mechanism that is distinct from that employed by eukaryotic replicons with this type of telomere and suggests the possibility of evolutionarily independent appearances of prokaryotic and eukaryotic replicons with covalently closed telomeres.

Indexed as

DNA-Binding ProteinsDNA HelicasesTrans-ActivatorsVirus ReplicationBacteriophagesDNA, ViralEnzyme PrecursorsMicroscopy, ElectronMutagenesis, Site-DirectedMutationPlasmidsProphagesProteinsReplication OriginTelomeraseViral ProteinsDNA-Binding ProteinsDNA HelicasesDNA, ViralEnzyme PrecursorsProteinsprotelomerase protein, Bacteriophage N15replication initiator proteinTelomeraseTrans-ActivatorsViral Proteins

Identifiers

PMID14602914
PMCPMC275552
OpenAlexW2083198342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.