Evidence map›Paper›PMID 14599798›Full record

ArticleVirology2003

Peptide domains involved in the localization of the porcine reproductive and respiratory syndrome virus nucleocapsid protein to the nucleolus.

Raymond R R Rowland, Paula Schneider, Ying Fang, Sarah Wootton, Dongwan Yoo, David A Benfield

Abstract read
In one paragraph

Article in Virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 65 citations in OpenAlex.

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  15. DExD/H-Box Helicase 36 SignalingFrontiers in immunology · 2017
    Article
  16. Article
  17. Review
  18. Viruses and the nucleolus: the fatal attraction.Biochimica et biophysica acta · 2014
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Raymond R R RowlandDepartment of Diagnostic Medicine and Pathobiology, 1800 Denison Avenue, Kansas State University, Manhattan, KS 66506, USA. browland@vet.ksu.edu
Paula Schneider
Ying Fang
Sarah Wootton
Dongwan Yoo
David A Benfield
Kansas State University · USSouth Dakota State University · USUniversity of Guelph · CA

Funding

FUNCTIONAL ROLES FOR AN ARTERIVIRUS N PROTEINR15GM061319 · NIGMS · SOUTH DAKOTA STATE UNIVERSITY · PI BENFIELD, DAVID A · 2000 to 2000
$107k
NIGMS NIH HHS R15GM61319-01
6 · The paper itself

Abstract

The nucleocapsid (N) protein of porcine reproductive and respiratory syndrome virus (PRRSV) is the principal component of the viral nucleocapsid and localizes to the nucleolus. Peptide sequence analysis of the N protein of several North American isolates identified two potential nuclear localization signal (NLS) sequences located at amino acids 10-13 and 41-42, which were labeled NLS-1 and NLS-2, respectively. Peptides containing NLS-1 or NLS-2 were sufficient to accumulate enhanced green fluorescent protein (EGFP) in the nucleus. The inactivation of NLS-1 by site-directed mutagenesis or the deletion of the first 14 amino acids did not affect N protein localization to the nucleolus. The substitution of key lysine residues with uncharged amino acids in NLS-2 blocked nuclear/nucleolar localization. Site-directed mutagenesis within NLS-2 identified the sequence, KKNKK, as forming the core localization domain within NLS-2. Using an in vitro pull-down assay, the N protein was able to bind importin-alpha, importin-beta nuclear transport proteins. The localization pattern of N-EGFP fusion peptides represented by a series of deletions from the C- and N-terminal ends of the N protein identified a region covering amino acids 41-72, which contained a nucleolar localization signal (NoLS) sequence. The 41-72 N peptide when fused to EGFP mimicked the nucleolar-cytoplasmic distribution of native N. These results identify a single NLS involved in the transport of N from the cytoplasm and into nucleus. An additional peptide sequence, overlapping NLS-2, is involved in the further targeting of N to the nucleolus.

Indexed as

Nuclear Localization SignalsActive Transport, Cell NucleusAmino Acid SequenceAnimalsCell LineCell NucleolusGene Expression Regulation, ViralGreen Fluorescent ProteinsLuminescent ProteinsMolecular Sequence DataNucleocapsid ProteinsPorcine respiratory and reproductive syndrome virusRecombinant Fusion ProteinsGreen Fluorescent ProteinsLuminescent ProteinsNuclear Localization SignalsNucleocapsid ProteinsRecombinant Fusion Proteins

Identifiers

PMID14599798
PMCPMC7125632
OpenAlexW2083786731

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.