Evidence map›Paper›PMID 14597725›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Multiple oscillators regulate circadian gene expression in Neurospora.

Alejandro Correa, Zachary A Lewis, Andrew V Greene, Irene J March, Richard H Gomer, Deborah Bell-Pedersen

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Principles of the animal molecular clock learned from Neurospora.The European journal of neuroscience · 2020
    Review
  5. Article
  6. Article
  7. The role of the circadian clock system in physiology.Pflugers Archiv : European journal of physiology · 2018
    Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Ecology and evolution · 2016
    Article
  13. Article
  14. Article
  15. The circadian system as an organizer of metabolism.Fungal genetics and biology : FG & B · 2016
    Review
  16. Article
  17. Article
  18. Article
  19. Circadian Control of Global Transcription.BioMed research international · 2015
    Review
  20. Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alejandro CorreaCenter for Biological Clocks Research, Department of Biology, Texas A&M University, College Station, TX 77843, USA.
Zachary A Lewis
Andrew V Greene
Irene J March
Richard H Gomer
Deborah Bell-Pedersen

Funding

The Circadian Clock in the Context of the Cyanobacterial CellP01NS039546 · NINDS · TEXAS A&M UNIVERSITY SYSTEM · PI BELL-PEDERSEN, DEBORAH · 2000 to 2010
$10.6M
Molecular Genetic Analysis of Fungal Circadian RythmsR01GM058529 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI BELL-PEDERSEN, DEBORAH · 1999 to 2017
$4.6M
NIGMS NIH HHS GM58529NIGMS NIH HHS R01 GM058529NINDS NIH HHS NS39546NINDS NIH HHS P01 NS039546
6 · The paper itself

Abstract

High-density microarrays were used to profile circadian gene expression in Neurospora crassa cultures grown in constant darkness. We identified 145 clock-controlled genes (ccgs). The ccgs peaked in mRNA accumulation at all phases of the day, with the majority peaking in the late night to early morning. The predicted or known functions of the ccgs demonstrate that the clock contributes to a wide range of cellular processes, including cell signaling, development, metabolism, and stress responses. Although the period of rhythm of most of the ccgs was found to depend on the well characterized frequency (FRQ)-based oscillator, three ccgs appeared to have a rhythm that was significantly short in the long period (29-h) frq7 mutant strain. These ccgs accumulate mRNA rhythmically with a circadian period in a frq-null strain, confirming the existence of a second oscillator in N. crassa.

Indexed as

Circadian RhythmExpressed Sequence TagsLightMutationNeurospora crassaOligonucleotide Array Sequence AnalysisOscillometryRNA, MessengerTime FactorsRNA, Messenger

Identifiers

PMID14597725
PMCPMC263859

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.