Evidence map›Paper›PMID 14585972›Full record

ArticleMolecular and cellular biology2003

Biochemical characterization of the Ran-RanBP1-RanGAP system: are RanBP proteins and the acidic tail of RanGAP required for the Ran-RanGAP GTPase reaction?

Michael J Seewald, Astrid Kraemer, Marian Farkasovsky, Carolin Körner, Alfred Wittinghofer, Ingrid R Vetter

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. RANBP17 Overexpression Restores Nucleocytoplasmic Transport and Ameliorates Neurodevelopment in Induced DYT1 Dystonia Motor Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  4. Mechanism of exportin retention in the cell nucleus.The Journal of cell biology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Ran GTPase: A Key Player in Tumor Progression and Metastasis.Frontiers in cell and developmental biology · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Small GTP-binding protein Ran is regulated by posttranslational lysine acetylation.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  15. Article
  16. The Ran Pathway in Drosophila melanogaster Mitosis.Frontiers in cell and developmental biology · 2015
    Review
  17. A structure-based benchmark for protein-protein binding affinity.Protein science : a publication of the Protein Society · 2011
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Michael J SeewaldMax-Planck Institut für Molekulare Physiology, Otto-Hahn-Strasse 11, 44227 Dortmund, Germany.
Astrid Kraemer
Marian Farkasovsky
Carolin Körner
Alfred Wittinghofer
Ingrid R Vetter
Max Planck Institute of Molecular Physiology · DEMax Planck Society · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RanBP type proteins have been reported to increase the catalytic efficiency of the RanGAP-mediated GTPase reaction on Ran. Since the structure of the Ran-RanBP1-RanGAP complex showed RanBP1 to be located away from the active site, we reinvestigated the reaction using fluorescence spectroscopy under pre-steady-state conditions. We can show that RanBP1 indeed does not influence the rate-limiting step of the reaction, which is the cleavage of GTP and/or the release of product P(i). It does, however, influence the dynamics of the Ran-RanGAP interaction, its most dramatic effect being the 20-fold stimulation of the already very fast association reaction such that it is under diffusion control (4.5 x 10(8) M(-1) s(-1)). Having established a valuable kinetic system for the interaction analysis, we also found, in contrast to previous findings, that the highly conserved acidic C-terminal end of RanGAP is not required for the switch-off reaction. Rather, genetic experiments in Saccharomyces cerevisiae demonstrate a profound effect of the acidic tail on microtubule organization during mitosis. We propose that the acidic tail of RanGAP is required for a process during mitosis.

Indexed as

Amino Acid SequenceBinding SitesGTPase-Activating ProteinsHumansIn Vitro TechniquesKineticsMacromolecular SubstancesModels, BiologicalModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedNuclear Proteinsran GTP-Binding ProteinRecombinant ProteinsSaccharomyces cerevisiaeSchizosaccharomycesGTPase-Activating ProteinsMacromolecular SubstancesNuclear Proteinsran-binding protein 1ran GTP-Binding ProteinRecombinant ProteinsSchizosaccharomyces pombe Proteins

Identifiers

PMID14585972
PMCPMC262373
OpenAlexW2115676808

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.