Evidence map›Paper›PMID 14581609›Full record

ArticleThe Journal of experimental medicine2003

The balance between Pax5 and Id2 activities is the key to AID gene expression.

Hiroyuki Gonda, Manabu Sugai, Yukiko Nambu, Tomoya Katakai, Yasutoshi Agata, Kazuhiro J Mori, Yoshifumi Yokota, Akira Shimizu

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 228 citations in OpenAlex.

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  10. Protocol forSTAR protocols · 2021
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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Hiroyuki GondaCenter for Molecular Biology and Genetics, Kyoto University, Sakyo-ku, Kyoto 606-8507, Japan.
Manabu Sugai
Yukiko Nambu
Tomoya Katakai
Yasutoshi Agata
Kazuhiro J Mori
Yoshifumi Yokota
Akira Shimizu
Kyoto University · JPNiigata University · JPUniversity of Fukui · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pax5 activity is enhanced in activated B cells and is essential for class switch recombination (CSR). We show that inhibitor of differentiation (Id)2 suppresses CSR by repressing the gene expression of activation-induced cytidine deaminase (AID), which has been shown to be indispensable for CSR. Furthermore, a putative regulatory region of AID contains E2A- and Pax5-binding sites, and the latter site is indispensable for AID gene expression. Moreover, the DNA-binding activity of Pax5 is decreased in Id2-overexpressing B cells and enhanced in Id2(-/-) B cells. The kinetics of Pax5, but not E2A, occupancy to AID locus is the same as AID expression in primary B cells. Finally, enforced expression of Pax5 induces AID transcription in pro-B cell lines. Our results provide evidence that the balance between Pax5 and Id2 activities has a key role in AID gene expression.

Indexed as

Repressor ProteinsAICDA (Activation-Induced Cytidine Deaminase)AnimalsBase SequenceCytidine DeaminaseDNADNA-Binding ProteinsDNA PrimersGene Expression Regulation, EnzymologicInhibitor of Differentiation Protein 2MiceMice, KnockoutMolecular Sequence DataPAX5 Transcription FactorPromoter Regions, GeneticSequence Homology, Nucleic AcidAICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseDNADNA-Binding ProteinsDNA PrimersIdb2 protein, mouseInhibitor of Differentiation Protein 2Pax5 protein, mousePAX5 Transcription FactorRepressor ProteinsTranscription Factors

Identifiers

PMID14581609
PMCPMC2194241
OpenAlexW2149737545

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.