Evidence map›Paper›PMID 14573473›Full record

ArticleGenetics2003

Mutations in eukaryotic release factors 1 and 3 act as general nonsense suppressors in Drosophila.

Anna T Chao, Herman A Dierick, Tracie M Addy, Amy Bejsovec

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Toward a Kinetic Understanding of Eukaryotic Translation.Cold Spring Harbor perspectives in biology · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Evolution of molecular error rates and the consequences for evolvability.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Anna T ChaoDepartment of Biology, Duke University, Durham, North Carolina 27708-1000, USA.
Herman A Dierick
Tracie M Addy
Amy Bejsovec
Duke University · USNorthwestern University · US

Funding

GENETIC CONTROL OF CELL FATE DIVERSITY IN DROSOPHILAR01GM059068 · NIGMS · NORTHWESTERN UNIVERSITY · PI BEJSOVEC, AMY M · 1999 to 2003
$714k
NIGMS NIH HHS GM-59068NIGMS NIH HHS R01 GM059068
6 · The paper itself

Abstract

In a screen for suppressors of the Drosophila wingless(PE4) nonsense allele, we isolated mutations in the two components that form eukaryotic release factor. eRF1 and eRF3 comprise the translation termination complex that recognizes stop codons and catalyzes the release of nascent polypeptide chains from ribosomes. Mutations disrupting the Drosophila eRF1 and eRF3 show a strong maternal-effect nonsense suppression due to readthrough of stop codons and are zygotically lethal during larval stages. We tested nonsense mutations in wg and in other embryonically acting genes and found that different stop codons can be suppressed but only a subset of nonsense alleles are subject to suppression. We suspect that the context of the stop codon is significant: nonsense alleles sensitive to suppression by eRF1 and eRF3 encode stop codons that are immediately followed by a cytidine. Such suppressible alleles appear to be intrinsically weak, with a low level of readthrough that is enhanced when translation termination is disrupted. Thus the eRF1 and eRF3 mutations provide a tool for identifying nonsense alleles that are leaky. Our findings have important implications for assigning null mutant phenotypes and for selecting appropriate alleles to use in suppressor screens.

Indexed as

AllelesAmino Acid SequenceAnimalsCodon, NonsenseDrosophilaDrosophila ProteinsMolecular Sequence DataPeptide Termination FactorsProto-Oncogene ProteinsWnt1 ProteinCodon, NonsenseDrosophila ProteinseRF1 protein, Drosophilapeptide-chain-release factor 3Peptide Termination FactorsProto-Oncogene Proteinswg protein, DrosophilaWnt1 Protein

Identifiers

PMID14573473
PMCPMC1462801
OpenAlexW2161727972

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.