Evidence map›Paper›PMID 14569028›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Conformation-dependent hydrophobic photolabeling of the nicotinic receptor: electrophysiology-coordinated photochemistry and mass spectrometry.

John F Leite, Michael P Blanton, Mona Shahgholi, Dennis A Dougherty, Henry A Lester

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Article
  3. Validation of membrane protein topology models by oxidative labeling and mass spectrometry.Journal of the American Society for Mass Spectrometry · 2012
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  9. Structural mechanisms underlying benzodiazepine modulation of the GABA(A) receptor.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
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  11. Article
  12. Article
  13. Review
  14. Article
  15. Time-resolved measurement of state-specific P2X2 ion channel cytosolic gating motions.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

John F LeiteDivisions of Biology and Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA. jleite@caltech.edu
Michael P Blanton
Mona Shahgholi
Dennis A Dougherty
Henry A Lester
Texas Tech University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We characterized the differential accessibility of the nicotinic acetylcholine receptor alpha1 subunit in the open, closed, and desensitized states by using electrophysiology-coordinated photolabeling by several lipophilic probes followed by mass spectrometric analysis. Voltage-clamped oocytes expressing receptors were preincubated with one of the lipophilic probes and were continually exposed to acetylcholine; UV irradiation was applied during 500-ms pulses to + 40 or to -140 mV (which produced closed or approximately 50% open receptors, respectively). In the open state, there was specific probe incorporation within the N-terminal domain at residues that align with the beta8-beta9 loop of the acetylcholine-binding protein. In the closed state, probe incorporation was identified at several sites of the N-terminal domain within the conserved cysteine loop (residues 128-142), the cytoplasmic loop (M3-M4), and M4. The labeling pattern in the M4 region is consistent with previous results, further defining the lipid-exposed face of this transmembrane alpha-helix. These results show regions within the N-terminal domain that are involved in gating-dependent conformational shifts, confirm that the cysteine loop resides at or near the protein-membrane interface, and show that segments of the M3-M4 loop are near to the lipid bilayer.

Indexed as

Amino Acid SequenceAnimalsCloning, MolecularElectrophysiologyMass SpectrometryMiceModels, MolecularMolecular Sequence DataMuscle, SkeletalPatch-Clamp TechniquesProtein ConformationProtein Structure, SecondaryProtein SubunitsReceptors, NicotinicRecombinant ProteinsProtein SubunitsReceptors, NicotinicRecombinant Proteins

Identifiers

PMID14569028
PMCPMC240743
OpenAlexW2146472592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.