Evidence map›Paper›PMID 14560029›Full record

ArticleMolecular and cellular biology2003

Swi1 prevents replication fork collapse and controls checkpoint kinase Cds1.

Eishi Noguchi, Chiaki Noguchi, Li-Lin Du, Paul Russell

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

104 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. The longevity and reversibility of quiescence inCell cycle (Georgetown, Tex.) · 2023
    Article
  5. The TIMELESS effort for timely DNA replication and protection.Cellular and molecular life sciences : CMLS · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Eishi NoguchiDepartment of Molecular Biology and Cell Biology, The Scripps Research Institute, La Jolla, California 92037, USA.
Chiaki Noguchi
Li-Lin Du
Paul Russell

Funding

Studies of the DNA Replication CheckpointR01GM059447 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI RUSSELL, PAUL · 1999 to 2016
$6.0M
NIGMS NIH HHS GM059447NIGMS NIH HHS R01 GM059447
6 · The paper itself

Abstract

The replication checkpoint is a dedicated sensor-response system activated by impeded replication forks. It stabilizes stalled forks and arrests division, thereby preserving genome integrity and promoting cell survival. In budding yeast, Tof1 is thought to act as a specific mediator of the replication checkpoint signal that activates the effector kinase Rad53. Here we report studies of fission yeast Swi1, a Tof1-related protein required for a programmed fork-pausing event necessary for mating type switching. Our studies have shown that Swi1 is vital for proficient activation of the Rad53-like checkpoint kinase Cds1. Together they are required to prevent fork collapse in the ribosomal DNA repeats, and they also prevent irreversible fork arrest at a newly identified hydroxyurea pause site. Swi1 also has Cds1-independent functions. Rad22 DNA repair foci form during S phase in swi1 mutants and to a lesser extent in cds1 mutants, indicative of fork collapse. Mus81, a DNA endonuclease required for recovery from collapsed forks, is vital in swi1 but not cds1 mutants. Swi1 is recruited to chromatin during S phase. We propose that Swi1 stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors.

Indexed as

DNA ReplicationEndonucleasesProtein Serine-Threonine KinasesAnimalsCell CycleCell Cycle ProteinsCell NucleusCheckpoint Kinase 2DNA-Binding ProteinsDNA, FungalProtein KinasesRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSchizosaccharomycesSchizosaccharomyces pombe ProteinsTranscription FactorsCds1 protein, S pombeCell Cycle ProteinsCheckpoint Kinase 2DNA-Binding ProteinsDNA, FungalEndonucleasesMUS81 protein, S cerevisiaeProtein KinasesProtein Serine-Threonine Kinasesrad52 protein, S pombeRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe Proteinsswi1 protein, S pombeTranscription Factors

Identifiers

PMID14560029
PMCPMC207622

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.