Evidence map›Paper›PMID 14555494›Full record

ArticleEukaryotic cell2003

Factors influencing the recombinational expansion and spread of telomeric tandem arrays in Kluyveromyces lactis.

Shobhana Natarajan, Cindy Groff-Vindman, Michael J McEachern

Abstract read
In one paragraph

Article in Eukaryotic cell, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Break-induced DNA replication.Cold Spring Harbor perspectives in biology · 2013
    Review
  6. DNA repair at telomeres: keeping the ends intact.Cold Spring Harbor perspectives in biology · 2013
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Telomeric circles: universal players in telomere maintenance?Nature structural & molecular biology · 2009
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Abrupt disruption of capping and a single source for recombinationally elongated telomeres in Kluyveromyces lactis.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Shobhana NatarajanDepartment of Genetics, University of Georgia, Athens, Georgia 30602, USA.
Cindy Groff-Vindman
Michael J McEachern

Funding

RECOMBINATIONAL TELOMERE MAINTENANCER01GM061645 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI MCEACHERN, MICHAEL J. · 2000 to 2010
$2.2M
NIGMS NIH HHS GM61645-01NIGMS NIH HHS R01 GM061645
6 · The paper itself

Abstract

We have previously shown that DNA circles containing telomeric repeats and a marker gene can promote the recombinational elongation of telomeres in Kluyveromyces lactis by a mechanism proposed to involve rolling-circle DNA synthesis. Wild-type cells acquire a long tandem array at a single telomere, while telomerase deletion (ter1-delta) cells, acquire an array and also spread it to multiple telomeres. In this study, we further examine the factors that affect the formation and spread of telomeric tandem arrays. We show that a telomerase(+) strain with short telomeres and high levels of subtelomeric gene conversion can efficiently form and spread arrays, while a telomere fusion mutant is not efficient at either process. This indicates that an elevated level of gene conversion near telomeres is required for spreading but that growth senescence and a tendency to elongate telomeres in the absence of exogenously added circles are not. Surprisingly, telomeric repeats are frequently deleted from a transforming URA3-telomere circle at or prior to the time of array formation by a mechanism dependent upon the presence of subtelomeric DNA in the circle. We further show that in a ter1-delta strain, long tandem arrays can arise from telomeres initially containing a single-copy insert of the URA3-telomere sequence. However, the reduced rate of array formation in such strains suggests that single-copy inserts are not typical intermediates in arrays formed from URA3-telomere circles. Using heteroduplex circles, we have demonstrated that either strand of a URA3-telomere circle can be utilized to form telomeric tandem arrays. Consistent with this, we demonstrate that 100-nucleotide single-stranded telomeric circles of either strand can promote recombinational telomere elongation.

Indexed as

Chromosomes, FungalDNA, CircularDNA, FungalFungal ProteinsGene ConversionGene DeletionGene DosageGene SilencingKluyveromycesMutationRecombination, GeneticTandem Repeat SequencesTelomeraseTelomereTransformation, GeneticDNA, CircularDNA, FungalFungal ProteinsTelomerase

Identifiers

PMID14555494
PMCPMC219379

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.