Evidence map›Paper›PMID 14551258›Full record

ArticleMolecular biology of the cell2003

Urmylation: a ubiquitin-like pathway that functions during invasive growth and budding in yeast.

April S Goehring, David M Rivers, George F Sprague

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 113 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Ubiquitination in cancer: mechanisms and therapeutic opportunities.Cancer communications (London, England) · 2025
    Review
  6. Screening and In Silico Analyses of the YeastFoods (Basel, Switzerland) · 2024
    Article
  7. Article
  8. The Ubiquitin-like Proteins ofBiomolecules · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Urm1: A Non-Canonical UBL.Biomolecules · 2021
    Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

April S GoehringInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403-1229, USA.
David M Rivers
George F Sprague
University of Oregon · US

Funding

MOLECULAR BIOLOGY AND BIOPHYSICST32GM007759 · NIGMS · UNIVERSITY OF OREGON · PI NOLEN, BRADLEY J · 1985 to 2021
$8.5M
DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007348 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe, KRYN STANKUNAS · 1989 to 2026
$6.8M
GENETIC REGULATION OF YEAST CELL TYPER01GM030027 · NIGMS · UNIVERSITY OF OREGON · PI SPRAGUE, GEORGE F. · 1985 to 2008
$3.0M
NICHD NIH HHS HD-07348NICHD NIH HHS T32 HD007348NIGMS NIH HHS GM-07759NIGMS NIH HHS GM-30027NIGMS NIH HHS R01 GM030027NIGMS NIH HHS T32 GM007759
6 · The paper itself

Abstract

Ubiquitin is a small modifier protein that is conjugated to substrates to target them for degradation. Recently, a surprising number of ubiquitin-like proteins have been identified that also can be attached to proteins. Herein, we identify two molecular functions for the posttranslational protein modifier from Saccharomyces cerevisiae, Urm1p. Simultaneous loss of Urm1p and Cla4p, a p21-activated kinase that functions in budding, is lethal. This result suggests a role for the urmylation pathway in budding. Furthermore, loss of the urmylation pathway causes defects in invasive growth and confers sensitivity to rapamycin. Our results indicate that the sensitivity to rapamycin is due to a genetic interaction with the TOR pathway, which is important for regulation of cell growth in response to nutrients. We have found that Urm1p can be attached to a number of proteins. Loss of five genes that are also essential in a cla4Delta strain, NCS2, NCS6, ELP2, ELP6, and URE2, affect the level of at least one Urm1p conjugate. Moreover, these five genes have a role in invasive growth and display genetic interactions with the TOR pathway. In summary, our results suggest the urmylation pathway is involved in nutrient sensing and budding.

Indexed as

Antibiotics, AntineoplasticCell Cycle ProteinsCloning, MolecularGlutathione PeroxidasePhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsPhosphotransferases (Alcohol Group Acceptor)PrionsProtein BindingProtein Serine-Threonine KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSirolimusAntibiotics, AntineoplasticCell Cycle ProteinsCLA4 protein, S cerevisiaeGlutathione PeroxidasePhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsPhosphotransferases (Alcohol Group Acceptor)PrionsProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsSirolimusTOR1 protein, S cerevisiaeTOR2 protein, S cerevisiaeURE2 protein, S cerevisiaeURM1 protein, S cerevisiae

Identifiers

PMID14551258
PMCPMC266754
OpenAlexW2106099205

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.