Evidence map›Paper›PMID 14532187›Full record

ArticleJournal of clinical microbiology2003

Evaluation of protocol using gene capture and PCR for detection of Helicobacter pylori DNA in feces.

W G MacKay, C L Williams, M McMillan, R N Ndip, A J Shepherd, L T Weaver

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

  1. Non-invasive diagnostic tests for Helicobacter pylori infection.The Cochrane database of systematic reviews · 2018
    Pooled it
  2. Clinical validation of a fecal PCR assay forJournal of clinical microbiology · 2026
    Observational
  3. Article
  4. Review
  5. Preliminary examination of herbal extracts on the inhibition of Helicobacter pylori.African journal of traditional, complementary, and alternative medicines : AJTCAM · 2014
    Article
  6. Article
  7. Intrafamilial Genotyping of Helicobacter pylori from Faecal DNA.Gastroenterology research and practice · 2011
    Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

W G MacKayDivision of Developmental Medicine, University of Glasgow, Glasgow, Scotland. wgmk1d@clinmed.gla.ac.uk
C L Williams
M McMillan
R N Ndip
A J Shepherd
L T Weaver
University of Glasgow · GBUniversity of Buea · CMUniversity of Stirling · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The route of transmission of Helicobacter pylori, which is usually acquired in childhood and is one of the most common bacterial infections in humans, remains undetermined. Mapping the distribution of H. pylori genotypes within families could help to determine the routes of transmission and risk factors. Here we describe a noninvasive method for obtaining H. pylori DNA isolates from the feces of children. Children presenting with gastrointestinal symptoms at the Royal Hospital for Sick Children were tested for gastric H. pylori colonization by using the 13C-urea breath test (UBT) and were asked to provide fecal samples, which were tested for H. pylori by using the HpSA fecal antigen test. DNA was purified from fecal samples by using a novel method of gene capture with subsequent H. pylori PCR analysis. Fifteen UBT-positive and 15 UBT-negative children participated in the study. The positive and negative predictive values for the assay were 80 and 100%, respectively. Fecal DNA purification followed by H. pylori PCR analysis is an effective tool for harvesting H. pylori DNA isolates from the feces of children. This technique may be developed to allow the diagnosis and noninvasive genotyping of H. pylori in children and their families.

Indexed as

Antigens, BacterialBreath TestsChildChild, PreschoolDNA, BacterialFecesHelicobacter InfectionsHelicobacter pyloriHumansPolymerase Chain ReactionSensitivity and SpecificityUreaAntigens, BacterialDNA, BacterialUrea

Identifiers

PMID14532187
PMCPMC254295
OpenAlexW1978868612

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.