Evidence map›Paper›PMID 14532101›Full record

ArticleApplied and environmental microbiology2003

Multiplex real-time PCR method to identify Shiga toxin genes stx1 and stx2 and Escherichia coli O157:H7/H- serotype.

Karen C Jinneman, Ken J Yoshitomi, Stephen D Weagant

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 104 citations in OpenAlex.

  1. Article
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  3. Recent Advancements in Technologies to Detect EnterohaemorrhagicJournal of microbiology and biotechnology · 2023
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  9. Observational
  10. Isolation and Physiomorphological Characterization ofInternational journal of microbiology · 2017
    Article
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Karen C JinnemanSeafood Products Research Center, Pacific Regional Laboratory Northwest, U.S. Food and Drug Administration, Bothell, Washington 98021, USA. Karen.Jinneman@fda.gov
Ken J Yoshitomi
Stephen D Weagant
United States Food and Drug Administration · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A multiplex real-time PCR method to simultaneously detect the stx1 and stx2 genes of Shiga toxin-producing Escherichia coli and a unique conserved single-nucleotide polymorphism in the E. coli O157:H7/H- uidA gene has been developed. There is more than 98.6% sensitivity and 100% specificity for all three gene targets based on a panel of 138 isolates. The PCR efficiencies were >/= 1.89, and as few as 6 CFU/reaction could be detected.

Indexed as

Bacterial Typing TechniquesColony Count, MicrobialDNA, BacterialEscherichia coli InfectionsEscherichia coli O157GlucuronidaseHumansPolymerase Chain ReactionPolymorphism, Single NucleotideSensitivity and SpecificitySerotypingShiga Toxin 1Shiga Toxin 2DNA, BacterialGlucuronidaseShiga Toxin 1Shiga Toxin 2

Identifiers

PMID14532101
PMCPMC201207
OpenAlexW1978611676

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.